Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rida family protein | CDQ89_05285 | Q8U308 | Negative | 1079847 - 1080254 | 14060.7 |
| rna polymerase sigma factor | CDQ89_05290 | P0A603 | Negative | 1080358 - 1081887 | 55425.6 |
| rok family protein | CDQ89_05295 | P9WIN0 | Negative | 1082065 - 1082868 | 27434.6 |
| rna polymerase sigma factor sigm | CDQ89_05300 | P46813 | Positive | 1082970 - 1083846 | 30457.1 |
| envelope integrity protein cei | CDQ89_05305 | Not Available | Negative | 1083852 - 1084520 | 22924.2 |
| duf4193 domain-containing protein | CDQ89_05310 | Not Available | Positive | 1084698 - 1085000 | 10946.5 |
| duf3093 domain-containing protein | CDQ89_05315 | Not Available | Negative | 1085005 - 1085490 | 17839.5 |
| dutp diphosphatase | CDQ89_05320 | A0QIM8 | Positive | 1085516 - 1085980 | 15901.1 |
| duf3710 domain-containing protein | CDQ89_05325 | Not Available | Positive | 1086061 - 1086834 | 27313.9 |
| alpha/beta hydrolase | CDQ89_05330 | Not Available | Negative | 1086850 - 1087545 | 23437.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



