Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | CDQ89_00335 | Q9ADP7 | Negative | 65489 - 66058 | 20575.2 |
| class i sam-dependent methyltransferase | CDQ89_00340 | C6CWS7 | Positive | 66141 - 66950 | 28912.9 |
| acyltransferase family protein | CDQ89_00345 | P54878 | Positive | 67036 - 67923 | 32762.4 |
| replicative dna helicase | CDQ89_00350 | Q9F5P4 | Negative | 68063 - 70690 | 95520.4 |
| 50s ribosomal protein l9 | CDQ89_00355 | Q744X5 | Negative | 71222 - 71680 | 16052.5 |
| 30s ribosomal protein s18 | CDQ89_00360 | Q744X6 | Negative | 71711 - 71965 | 9512.67 |
| rna polymerase sigma factor sigm | CDQ89_00365 | Q9AFI5 | Negative | 72007 - 72512 | 18139.2 |
| 30s ribosomal protein s6 | CDQ89_00370 | Q744V6 | Negative | 72630 - 72920 | 10994.3 |
| dj-1/pfpi family protein | CDQ89_00375 | Q8G9F9 | Negative | 73055 - 73696 | 22886.6 |
| duf2029 domain-containing protein | CDQ89_00380 | Not Available | Negative | 73693 - 75330 | 59616.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



