Niallia oryzisoli 1DS3-10

Gram-positiveRod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Niallia

Description

Niallia oryzisoli 1DS3-10 is a Gram-positive, rod-shaped bacterium. This organism possesses a single replicon, indicating a streamlined genomic structure. The accession number for its genetic material is CP137640.1, which can be referenced for specific genomic information. As a Gram-positive bacterium, Niallia oryzisoli 1DS3-10 likely exhibits a thicker peptidoglycan layer in its cell wall compared to Gram-negative bacteria, which can influence its susceptibility to antibiotics and environmental conditions. The rod shape may facilitate its movement and nutrient uptake in various environments. Understanding the characteristics of Niallia oryzisoli 1DS3-10 contributes to a larger ecological picture, particularly in relation to its habitat. Given its name, it is associated with rice soil, suggesting that it may play a role in the soil microbiome of rice paddies. Such bacteria can be critical for nutrient cycling and soil health, potentially influencing plant growth and soil fertility. The study of its traits can provide insights into its ecological function and interactions within its environment, which is essential for understanding agricultural ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusNiallia
SpeciesNiallia oryzisoli
Strain1DS3-10

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Niallia oryzisoli 1DS3-10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Niallia oryzisoli 1DS3-10, Complete Genome

Gene Summary

Adenine Count

1930133 bp

Thymine Count

1914664 bp

Guanine Count

1198838 bp

Cytosine Count

1187869 bp

Genome Length

6231504 bp

Protein-coding Genes

5971 genes

Non-Coding Genes

217 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha-ketoacid dehydrogenase subunit betaR4Z09_25465O34591Negative5090342 - 509140037796.4
thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alphaR4Z09_25470O31404Negative5091419 - 509236634092.3
dihydrolipoyl dehydrogenaseR4Z09_25475P54533Negative5092391 - 509374348837.6
sigma-54-dependent fis family transcriptional regulatorR4Z09_25480P26047Negative5094009 - 509599774821.7
gtra family proteinR4Z09_25485Not AvailableNegative5096169 - 509661517048.3
phosphatidylglycerol lysyltransferase domain-containing proteinR4Z09_25490C0H3X7Negative5096674 - 509777742748.5
glycerophosphodiester phosphodiesteraseR4Z09_25495P37965Negative5097970 - 509878530559.3
dmt family transporterR4Z09_25500P44170Negative5099333 - 510016930080.0
pyruvate kinaseR4Z09_25505Q9M3B6Negative5100309 - 510209967378.2
endospore germination permeaseR4Z09_25510Q9ZFB5Positive5102366 - 510345140561.5

Displaying genes 5091 – 5100 of 6188 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.