Niallia oryzisoli 1DS3-10

Gram-positiveRod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Niallia

Description

Niallia oryzisoli 1DS3-10 is a Gram-positive, rod-shaped bacterium. This organism possesses a single replicon, indicating a streamlined genomic structure. The accession number for its genetic material is CP137640.1, which can be referenced for specific genomic information. As a Gram-positive bacterium, Niallia oryzisoli 1DS3-10 likely exhibits a thicker peptidoglycan layer in its cell wall compared to Gram-negative bacteria, which can influence its susceptibility to antibiotics and environmental conditions. The rod shape may facilitate its movement and nutrient uptake in various environments. Understanding the characteristics of Niallia oryzisoli 1DS3-10 contributes to a larger ecological picture, particularly in relation to its habitat. Given its name, it is associated with rice soil, suggesting that it may play a role in the soil microbiome of rice paddies. Such bacteria can be critical for nutrient cycling and soil health, potentially influencing plant growth and soil fertility. The study of its traits can provide insights into its ecological function and interactions within its environment, which is essential for understanding agricultural ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusNiallia
SpeciesNiallia oryzisoli
Strain1DS3-10

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Niallia oryzisoli 1DS3-10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Niallia oryzisoli 1DS3-10, Complete Genome

Gene Summary

Adenine Count

1930133 bp

Thymine Count

1914664 bp

Guanine Count

1198838 bp

Cytosine Count

1187869 bp

Genome Length

6231504 bp

Protein-coding Genes

5971 genes

Non-Coding Genes

217 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3987 domain-containing proteinR4Z09_24515P52124Negative4887817 - 489021991173.1
helix-turn-helix domain-containing proteinR4Z09_24520Not AvailableNegative4890258 - 489056011814.4
hypothetical proteinR4Z09_24525Not AvailableNegative4890560 - 48907547700.62
hypothetical proteinR4Z09_24530Not AvailablePositive4890984 - 489194637714.2
site-specific integraseR4Z09_24535P96629Positive4892005 - 489316245353.8
fe-s cluster assembly protein sufbR4Z09_24540O32162Negative4893251 - 489464852371.3
suf system nifu family fe-s cluster assembly proteinR4Z09_24545O32163Negative4894729 - 489517216428.5
cysteine desulfuraseR4Z09_24550O32164Negative4895162 - 489639145023.8
fe-s cluster assembly protein sufdR4Z09_24555O32165Negative4896391 - 489770148480.6
fe-s cluster assembly atpase sufcR4Z09_24560P80866Negative4897719 - 489850428877.9

Displaying genes 4901 – 4910 of 6188 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.