Niallia oryzisoli 1DS3-10

Gram-positiveRod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Niallia

Description

Niallia oryzisoli 1DS3-10 is a Gram-positive, rod-shaped bacterium. This organism possesses a single replicon, indicating a streamlined genomic structure. The accession number for its genetic material is CP137640.1, which can be referenced for specific genomic information. As a Gram-positive bacterium, Niallia oryzisoli 1DS3-10 likely exhibits a thicker peptidoglycan layer in its cell wall compared to Gram-negative bacteria, which can influence its susceptibility to antibiotics and environmental conditions. The rod shape may facilitate its movement and nutrient uptake in various environments. Understanding the characteristics of Niallia oryzisoli 1DS3-10 contributes to a larger ecological picture, particularly in relation to its habitat. Given its name, it is associated with rice soil, suggesting that it may play a role in the soil microbiome of rice paddies. Such bacteria can be critical for nutrient cycling and soil health, potentially influencing plant growth and soil fertility. The study of its traits can provide insights into its ecological function and interactions within its environment, which is essential for understanding agricultural ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusNiallia
SpeciesNiallia oryzisoli
Strain1DS3-10

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Niallia oryzisoli 1DS3-10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Niallia oryzisoli 1DS3-10, Complete Genome

Gene Summary

Adenine Count

1930133 bp

Thymine Count

1914664 bp

Guanine Count

1198838 bp

Cytosine Count

1187869 bp

Genome Length

6231504 bp

Protein-coding Genes

5971 genes

Non-Coding Genes

217 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aromatic ring-hydroxylating dioxygenase subunit alphaR4Z09_11100Q51974Positive2204050 - 220532448248.7
aromatic-ring-hydroxylating dioxygenase subunit betaR4Z09_11105Q51975Positive2205321 - 220580018369.1
yebc/pmpr family dna-binding transcriptional regulatorR4Z09_11110A7Z282Positive2206017 - 220673626477.9
phage integrase n-terminal sam-like domain-containing proteinR4Z09_11115Not AvailablePositive2206884 - 22070787853.4
tyrosine-type recombinase/integraseR4Z09_11120O26979Positive2207476 - 220779612289.0
hypothetical proteinR4Z09_11125Not AvailablePositive2207916 - 22080505011.92
hypothetical proteinR4Z09_11130O31917Positive2208712 - 22089759839.91
duf2513 domain-containing proteinR4Z09_11135P44181Positive2209206 - 220951112139.7
mmpl family transporterR4Z09_11140O88022Positive2210124 - 221223277808.4
na/pi cotransporter family proteinR4Z09_11145P54463Negative2212276 - 221392560293.7

Displaying genes 2221 – 2230 of 6188 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.