Niallia oryzisoli 1DS3-10

Gram-positiveRod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Niallia

Description

Niallia oryzisoli 1DS3-10 is a Gram-positive, rod-shaped bacterium. This organism possesses a single replicon, indicating a streamlined genomic structure. The accession number for its genetic material is CP137640.1, which can be referenced for specific genomic information. As a Gram-positive bacterium, Niallia oryzisoli 1DS3-10 likely exhibits a thicker peptidoglycan layer in its cell wall compared to Gram-negative bacteria, which can influence its susceptibility to antibiotics and environmental conditions. The rod shape may facilitate its movement and nutrient uptake in various environments. Understanding the characteristics of Niallia oryzisoli 1DS3-10 contributes to a larger ecological picture, particularly in relation to its habitat. Given its name, it is associated with rice soil, suggesting that it may play a role in the soil microbiome of rice paddies. Such bacteria can be critical for nutrient cycling and soil health, potentially influencing plant growth and soil fertility. The study of its traits can provide insights into its ecological function and interactions within its environment, which is essential for understanding agricultural ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusNiallia
SpeciesNiallia oryzisoli
Strain1DS3-10

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Niallia oryzisoli 1DS3-10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Niallia oryzisoli 1DS3-10, Complete Genome

Gene Summary

Adenine Count

1930133 bp

Thymine Count

1914664 bp

Guanine Count

1198838 bp

Cytosine Count

1187869 bp

Genome Length

6231504 bp

Protein-coding Genes

5971 genes

Non-Coding Genes

217 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
divergent pap2 family proteinR4Z09_08300O32107Positive1648802 - 164926016715.9
duf6123 family proteinR4Z09_08305Not AvailablePositive1649330 - 164960210323.6
reverse transcriptase-like proteinR4Z09_08310P54162Negative1649679 - 165006814428.2
reverse transcriptase-like proteinR4Z09_08315P54164Positive1650265 - 165092125213.0
zinc-finger domain-containing proteinR4Z09_08320P54165Positive1650949 - 16511527849.54
cold-shock protein cspdR4Z09_08325P51777Negative1651194 - 16513947292.48
dna topoisomerase iiiR4Z09_08330P34184Positive1651841 - 165398881621.8
duf3905 domain-containing proteinR4Z09_08335Not AvailableNegative1654040 - 165438412821.0
hypothetical proteinR4Z09_08340C0H402Positive1654545 - 16547065971.91
hypothetical proteinR4Z09_08345Not AvailablePositive1654710 - 16548716114.35

Displaying genes 1661 – 1670 of 6188 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.