Niallia oryzisoli 1DS3-10

Gram-positiveRod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Niallia

Description

Niallia oryzisoli 1DS3-10 is a Gram-positive, rod-shaped bacterium. This organism possesses a single replicon, indicating a streamlined genomic structure. The accession number for its genetic material is CP137640.1, which can be referenced for specific genomic information. As a Gram-positive bacterium, Niallia oryzisoli 1DS3-10 likely exhibits a thicker peptidoglycan layer in its cell wall compared to Gram-negative bacteria, which can influence its susceptibility to antibiotics and environmental conditions. The rod shape may facilitate its movement and nutrient uptake in various environments. Understanding the characteristics of Niallia oryzisoli 1DS3-10 contributes to a larger ecological picture, particularly in relation to its habitat. Given its name, it is associated with rice soil, suggesting that it may play a role in the soil microbiome of rice paddies. Such bacteria can be critical for nutrient cycling and soil health, potentially influencing plant growth and soil fertility. The study of its traits can provide insights into its ecological function and interactions within its environment, which is essential for understanding agricultural ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusNiallia
SpeciesNiallia oryzisoli
Strain1DS3-10

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Niallia oryzisoli 1DS3-10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Niallia oryzisoli 1DS3-10, Complete Genome

Gene Summary

Adenine Count

1930133 bp

Thymine Count

1914664 bp

Guanine Count

1198838 bp

Cytosine Count

1187869 bp

Genome Length

6231504 bp

Protein-coding Genes

5971 genes

Non-Coding Genes

217 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
replication-associated recombination protein aR4Z09_06450O34528Positive1300049 - 130133547076.7
rrf2 family transcriptional regulatorR4Z09_06455O34527Positive1301525 - 130194415406.5
cysteine desulfurase family proteinR4Z09_06460O34599Positive1301978 - 130312341678.9
trna 2-thiouridine(34) synthase mnmaR4Z09_06465Q812R6Positive1303131 - 130424641765.8
tetratricopeptide repeat proteinR4Z09_06470O34452Positive1304386 - 130504224738.1
atp-dependent recd-like dna helicaseR4Z09_06475O34481Positive1305088 - 130749690996.6
prc-barrel domain-containing proteinR4Z09_06480O34402Positive1307634 - 130810417482.5
hypothetical proteinR4Z09_06485C0H462Positive1308120 - 13083117320.66
yrzq family proteinR4Z09_06490C0H461Positive1308329 - 13084604919.23
ai-2e family transporterR4Z09_06495O34472Positive1308585 - 130968841645.0

Displaying genes 1291 – 1300 of 6188 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.