Natrinema halophilum YPL8

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Natrinema

Description

Natrinema halophilum YPL8 is characterized by having three distinct replicons, which are essential for its genetic stability and adaptability in extreme environments. The genomic data for this organism is cataloged under the following accessions: CP058601.1, CP084880.1, and CP084881.1. These accessions represent the complete genomic sequences that provide insights into the organism's genetic makeup. Natrinema halophilum YPL8 is a halophilic archaeon, meaning it thrives in high-salinity environments, which is a key trait that defines its ecological niche. The presence of multiple replicons may confer advantages such as increased genetic flexibility and the ability to respond to environmental stressors, which is critical for survival in its extreme habitats. The genomic architecture of Natrinema halophilum YPL8, with its three replicons, suggests a complex regulatory system that may allow for efficient adaptation to fluctuating salinity levels. Understanding the genetic framework of this organism can shed light on its mechanisms for osmoregulation and stress response, which are vital for its ecology. This knowledge could also have broader implications for biotechnology, particularly in applications that harness extremophiles for industrial processes or bioremediation in saline conditions.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusNatrinema
SpeciesNatrinema halophilum
StrainYPL8

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Natrinema halophilum YPL8, Complete Genome

Gene Summary

Adenine Count

858659 bp

Thymine Count

858285 bp

Guanine Count

1323051 bp

Cytosine Count

1319801 bp

Genome Length

4359796 bp

Protein-coding Genes

4126 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2299 family proteinHYG82_21705Not AvailableNegative71339 - 7180918005.2
acyl-coa/acyl-acp dehydrogenaseHYG82_21710H6LGM6Negative71904 - 7304942051.4
hypothetical proteinHYG82_21715Not AvailableNegative73358 - 736039387.99
acyl-coa carboxylaseHYG82_21720I3R7F1Negative73749 - 7534157595.4
abc transporter atp-binding proteinHYG82_21725P21630Negative75506 - 7622226595.3
abc transporter atp-binding proteinHYG82_21730P0A9S8Negative76219 - 7697127585.8
branched-chain amino acid abc transporter permeaseHYG82_21735P21628Negative76964 - 7804039469.6
branched-chain amino acid abc transporter permeaseHYG82_21740P21627Negative78037 - 7890630423.2
abc transporter substrate-binding proteinHYG82_21745Q9HUQ0Negative80129 - 8132843519.9
mfs transporterHYG82_21750O34456Positive82088 - 8334444956.9

Displaying genes 4271 – 4280 of 4674 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.