Natrinema halophilum YPL8

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Natrinema

Description

Natrinema halophilum YPL8 is characterized by having three distinct replicons, which are essential for its genetic stability and adaptability in extreme environments. The genomic data for this organism is cataloged under the following accessions: CP058601.1, CP084880.1, and CP084881.1. These accessions represent the complete genomic sequences that provide insights into the organism's genetic makeup. Natrinema halophilum YPL8 is a halophilic archaeon, meaning it thrives in high-salinity environments, which is a key trait that defines its ecological niche. The presence of multiple replicons may confer advantages such as increased genetic flexibility and the ability to respond to environmental stressors, which is critical for survival in its extreme habitats. The genomic architecture of Natrinema halophilum YPL8, with its three replicons, suggests a complex regulatory system that may allow for efficient adaptation to fluctuating salinity levels. Understanding the genetic framework of this organism can shed light on its mechanisms for osmoregulation and stress response, which are vital for its ecology. This knowledge could also have broader implications for biotechnology, particularly in applications that harness extremophiles for industrial processes or bioremediation in saline conditions.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusNatrinema
SpeciesNatrinema halophilum
StrainYPL8

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Natrinema halophilum YPL8, Complete Genome

Gene Summary

Adenine Count

858659 bp

Thymine Count

858285 bp

Guanine Count

1323051 bp

Cytosine Count

1319801 bp

Genome Length

4359796 bp

Protein-coding Genes

4126 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap transporter fused permease subunitHYG82_15645P44993Negative3300602 - 330293281863.7
taxi family trap transporter solute-binding subunitHYG82_15650P0A3T3Negative3302997 - 330405538006.4
acyl-coa dehydrogenase family proteinHYG82_15655Q2KHZ9Positive3304478 - 330564142837.5
iclr family transcriptional regulatorHYG82_15660D4GP42Positive3305812 - 330658228464.3
cellulase family glycosylhydrolaseHYG82_15665P19570Negative3307955 - 330979067232.2
cellulase family glycosylhydrolaseHYG82_15670P22541Negative3310022 - 331200170616.5
helix-turn-helix domain-containing proteinHYG82_15675D4GPG1Negative3312484 - 331317625736.1
cellulase family glycosylhydrolaseHYG82_15680A0A0U4EBH5Negative3313510 - 331529465091.6
pkd domain-containing proteinHYG82_21190Not AvailableNegative3315424 - 331686350322.7
hypothetical proteinHYG82_15695Not AvailablePositive3317060 - 331741912947.1

Displaying genes 3151 – 3160 of 4674 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.