Phycicoccus endophyticus JP6SC6

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Intrasporangiaceae

Genus

Phycicoccus

Description

Phycicoccus endophyticus JP6SC6 is characterized by having a single replicon, indicating a streamlined genetic organization. This trait suggests a potentially efficient replication mechanism, which may contribute to its adaptability in various environments. The strain is cataloged under the accession number CP060712.1, providing a reference for genomic studies and further research. As an endophytic organism, Phycicoccus endophyticus JP6SC6 likely resides within plant tissues, where it may play a role in plant health and growth. Endophytes are known to enhance nutrient uptake, provide stress resistance, and produce bioactive compounds beneficial to their host plants. The specific interactions between Phycicoccus endophyticus JP6SC6 and its host, however, require further investigation to elucidate its ecological impact. Overall, the presence of Phycicoccus endophyticus JP6SC6 in plant systems highlights the importance of microbial symbionts in promoting plant resilience and health. Understanding its genetic framework and ecological contributions could pave the way for applications in agriculture and biotechnology, particularly in enhancing crop productivity and sustainability.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyIntrasporangiaceae
GenusPhycicoccus
SpeciesPhycicoccus endophyticus
StrainJP6SC6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phycicoccus endophyticus JP6SC6, Complete Genome

Gene Summary

Adenine Count

423527 bp

Thymine Count

425360 bp

Guanine Count

1199380 bp

Cytosine Count

1190959 bp

Genome Length

3239226 bp

Protein-coding Genes

3041 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arginine-ornithine antiporterH9L10_04755P18275Negative982135 - 98351448500.0
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive983767 - 984149Not Available
b12-binding domain-containing proteinH9L10_04765Q50899Positive984240 - 98492623822.0
mbl fold metallo-hydrolaseH9L10_04770P71839Positive984969 - 98562523279.6
rok family proteinH9L10_04775A5U654Negative985630 - 98640927441.6
type i methionyl aminopeptidaseH9L10_04780P9WK18Negative986406 - 98727831537.2
methionine aminopeptidaseH9L10_04785Not AvailablePositive987322 - 9875257797.58
nad(p)h-binding proteinH9L10_04790Not AvailableNegative987530 - 98817622804.6
3-methyl-2-oxobutanoate hydroxymethyltransferaseH9L10_04795A4FA49Negative988215 - 98908730668.9
immune inhibitor aH9L10_04800P23382Positive989354 - 99166383761.3

Displaying genes 951 – 960 of 3118 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.