Phycicoccus endophyticus JP6SC6

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Intrasporangiaceae

Genus

Phycicoccus

Description

Phycicoccus endophyticus JP6SC6 is characterized by having a single replicon, indicating a streamlined genetic organization. This trait suggests a potentially efficient replication mechanism, which may contribute to its adaptability in various environments. The strain is cataloged under the accession number CP060712.1, providing a reference for genomic studies and further research. As an endophytic organism, Phycicoccus endophyticus JP6SC6 likely resides within plant tissues, where it may play a role in plant health and growth. Endophytes are known to enhance nutrient uptake, provide stress resistance, and produce bioactive compounds beneficial to their host plants. The specific interactions between Phycicoccus endophyticus JP6SC6 and its host, however, require further investigation to elucidate its ecological impact. Overall, the presence of Phycicoccus endophyticus JP6SC6 in plant systems highlights the importance of microbial symbionts in promoting plant resilience and health. Understanding its genetic framework and ecological contributions could pave the way for applications in agriculture and biotechnology, particularly in enhancing crop productivity and sustainability.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyIntrasporangiaceae
GenusPhycicoccus
SpeciesPhycicoccus endophyticus
StrainJP6SC6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phycicoccus endophyticus JP6SC6, Complete Genome

Gene Summary

Adenine Count

423527 bp

Thymine Count

425360 bp

Guanine Count

1199380 bp

Cytosine Count

1190959 bp

Genome Length

3239226 bp

Protein-coding Genes

3041 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aminoacyl-trna hydrolaseH9L10_01905P40711Negative392091 - 39252815816.9
dna polymerase domain-containing proteinH9L10_01910Q9I1X7Negative392528 - 39351736704.0
nad(p)h-binding proteinH9L10_01915P0A5A4Positive393777 - 39621489593.6
m23 family metallopeptidaseH9L10_01920O05156Negative396288 - 39706727891.7
m4 family metallopeptidaseH9L10_01925P83543Positive397467 - 39953971196.6
adp-forming succinate--coa ligase subunit betaH9L10_01930B2GM49Positive399728 - 40090641236.7
succinate--coa ligase subunit alphaH9L10_01935Q7U0Z0Positive400938 - 40183130144.2
phosphoribosylglycinamide formyltransferaseH9L10_01940P9WHM4Positive402966 - 40371827104.9
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolaseH9L10_01945A1SMP8Positive403871 - 40549356702.0
ring-opening amidohydrolaseH9L10_01950Q8RSQ2Negative405551 - 40667839706.9

Displaying genes 431 – 440 of 3118 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.