Phycicoccus endophyticus JP6SC6

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Intrasporangiaceae

Genus

Phycicoccus

Description

Phycicoccus endophyticus JP6SC6 is characterized by having a single replicon, indicating a streamlined genetic organization. This trait suggests a potentially efficient replication mechanism, which may contribute to its adaptability in various environments. The strain is cataloged under the accession number CP060712.1, providing a reference for genomic studies and further research. As an endophytic organism, Phycicoccus endophyticus JP6SC6 likely resides within plant tissues, where it may play a role in plant health and growth. Endophytes are known to enhance nutrient uptake, provide stress resistance, and produce bioactive compounds beneficial to their host plants. The specific interactions between Phycicoccus endophyticus JP6SC6 and its host, however, require further investigation to elucidate its ecological impact. Overall, the presence of Phycicoccus endophyticus JP6SC6 in plant systems highlights the importance of microbial symbionts in promoting plant resilience and health. Understanding its genetic framework and ecological contributions could pave the way for applications in agriculture and biotechnology, particularly in enhancing crop productivity and sustainability.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyIntrasporangiaceae
GenusPhycicoccus
SpeciesPhycicoccus endophyticus
StrainJP6SC6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phycicoccus endophyticus JP6SC6, Complete Genome

Gene Summary

Adenine Count

423527 bp

Thymine Count

425360 bp

Guanine Count

1199380 bp

Cytosine Count

1190959 bp

Genome Length

3239226 bp

Protein-coding Genes

3041 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna-binding proteinH9L10_13610Q9RCA6Negative2830373 - 283093320311.5
hypothetical proteinH9L10_13615Not AvailableNegative2830930 - 28311186036.87
membrane protein insertase yidcH9L10_13620O54569Negative2831189 - 283216035461.4
membrane protein insertion efficiency factor yiddH9L10_13625Q2IHR6Negative2832217 - 283253711570.0
ribonuclease p protein componentH9L10_13630P25817Negative2832534 - 283289912359.2
50s ribosomal protein l34H9L10_13635C5C6N9Negative2832909 - 28330465310.61
chromosomal replication initiator protein dnaaH9L10_13640A6W3V4Positive2833426 - 283494656600.3
dna polymerase iii subunit betaH9L10_13645P27903Positive2835639 - 283677239758.1
decarboxylating 6-phosphogluconate dehydrogenaseH9L10_13650G5EBD7Positive2836886 - 283796238199.6
dna replication/repair protein recfH9L10_13655A6W3V7Positive2837971 - 283926946340.9

Displaying genes 2721 – 2730 of 3118 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.