Phycicoccus endophyticus JP6SC6

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Intrasporangiaceae

Genus

Phycicoccus

Description

Phycicoccus endophyticus JP6SC6 is characterized by having a single replicon, indicating a streamlined genetic organization. This trait suggests a potentially efficient replication mechanism, which may contribute to its adaptability in various environments. The strain is cataloged under the accession number CP060712.1, providing a reference for genomic studies and further research. As an endophytic organism, Phycicoccus endophyticus JP6SC6 likely resides within plant tissues, where it may play a role in plant health and growth. Endophytes are known to enhance nutrient uptake, provide stress resistance, and produce bioactive compounds beneficial to their host plants. The specific interactions between Phycicoccus endophyticus JP6SC6 and its host, however, require further investigation to elucidate its ecological impact. Overall, the presence of Phycicoccus endophyticus JP6SC6 in plant systems highlights the importance of microbial symbionts in promoting plant resilience and health. Understanding its genetic framework and ecological contributions could pave the way for applications in agriculture and biotechnology, particularly in enhancing crop productivity and sustainability.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyIntrasporangiaceae
GenusPhycicoccus
SpeciesPhycicoccus endophyticus
StrainJP6SC6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phycicoccus endophyticus JP6SC6, Complete Genome

Gene Summary

Adenine Count

423527 bp

Thymine Count

425360 bp

Guanine Count

1199380 bp

Cytosine Count

1190959 bp

Genome Length

3239226 bp

Protein-coding Genes

3041 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar transferaseH9L10_08755B3FN88Positive1817857 - 181890037673.1
sugar transferaseH9L10_08760B3FN88Positive1818789 - 181915113916.0
serine hydroxymethyltransferaseH9L10_08765Q8R887Negative1819159 - 182043945256.5
threonylcarbamoyl-amp synthaseH9L10_08770P9WGC8Negative1820432 - 182114524760.5
peptide chain release factor n(5)-glutamine methyltransferaseH9L10_08775Q9K4E3Negative1821253 - 182211629925.7
peptide chain release factor 1H9L10_08780A0LSK4Negative1822113 - 182318939265.8
50s ribosomal protein l31H9L10_08785A1SHH8Negative1823269 - 18234847840.3
hypothetical proteinH9L10_08790Not AvailableNegative1823781 - 182471333596.5
llm class flavin-dependent oxidoreductaseH9L10_08795Q3JSR8Positive1824858 - 182571230811.5
transcription termination factor rhoH9L10_08800P52157Negative1825723 - 182747464799.4

Displaying genes 1751 – 1760 of 3118 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.