Treponema saccharophilum PB

Gram-negativeSpirillaanaerobic

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Treponematales

Family

Treponemataceae

Genus

Treponema

Description

Treponema saccharophilum PB is a Gram-negative, anaerobic bacterium characterized by its spirilla shape and the presence of flagella. This organism is notable for having four replicons, which may play a role in its genetic diversity and adaptability in anaerobic environments. The anaerobic nature of T. saccharophilum PB suggests its ecological niche is likely in environments devoid of oxygen, which is common for many spirochetes. The presence of flagella indicates that this species is motile, potentially allowing it to navigate through viscous environments, such as those found in soil or within the gastrointestinal tracts of animals. The specific accessions associated with T. saccharophilum PB—AP025288.1, AP025291.1, AP025289.1, and AP025290.1—provide a basis for further genomic and phylogenetic studies. These sequences can help elucidate its evolutionary relationships within the Treponema genus and its functional capabilities in anaerobic ecosystems. In summary, Treponema saccharophilum PB exemplifies a specialized anaerobic lifestyle, with its motility and genetic characteristics potentially contributing to its ecological role in nutrient cycling within anaerobic habitats.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderTreponematales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema saccharophilum
StrainPB

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Treponema saccharophilum PB
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatbovine rumen fluid; rumen of cows
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Treponema saccharophilum PB, Complete Genome

Gene Summary

Adenine Count

609161 bp

Thymine Count

598987 bp

Guanine Count

718670 bp

Cytosine Count

718364 bp

Genome Length

2645182 bp

Protein-coding Genes

2133 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad(p) transhydrogenase subunit alphaTRSA_01410Q2RSB2Negative172905 - 17403540570.4
short-chain dehydrogenaseTRSA_01420P50199Positive174301 - 17507427244.8
uronate isomeraseTRSA_01430C0QWA9Positive175411 - 17682053053.6
hypothetical proteinTRSA_01440Q8BYI9Positive177118 - 17936782032.0
hypothetical proteinTRSA_01450Not AvailablePositive179410 - 18062444474.0
hypothetical proteinTRSA_01460O48449Positive180635 - 18140827981.1
hypothetical proteinTRSA_01470Q9U518Positive181422 - 18338672186.7
hypothetical proteinTRSA_01480Q8C8H8Positive183402 - 18492557147.1
hypothetical proteinTRSA_01490Not AvailablePositive184959 - 18596636253.2
hypothetical proteinTRSA_01500Not AvailablePositive186147 - 18647312404.9

Displaying genes 141 – 150 of 2880 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.