Polaribacter marinaquae RZW3-2

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Polaribacter

Description

Polaribacter marinaquae RZW3-2 is a Gram-negative bacterium characterized by its rod shape. This species has a single replicon, indicating a streamlined genomic organization. The genomic information for Polaribacter marinaquae RZW3-2 is documented under the accession number CP150496.1. As a member of the Polaribacter genus, this organism is likely adapted to marine environments, which may play a role in biogeochemical processes. The traits of being Gram-negative and rod-shaped suggest that it may exhibit specific physiological and ecological characteristics common to this group of bacteria, such as the presence of an outer membrane and a periplasmic space, which could influence its interaction with other microorganisms and its environment. Understanding the genomic and morphological traits of Polaribacter marinaquae RZW3-2 can provide insights into its ecological role in marine ecosystems, particularly concerning nutrient cycling and microbial community dynamics. This bacterium may contribute to the degradation of organic matter and the overall health of marine habitats, reflecting the intricate relationships within microbial communities in oceanic environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPolaribacter
SpeciesPolaribacter marinaquae
StrainRZW3-2

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Polaribacter marinaquae RZW3-2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaribacter marinaquae RZW3-2, Complete Genome

Gene Summary

Adenine Count

1112163 bp

Thymine Count

1103952 bp

Guanine Count

477173 bp

Cytosine Count

472247 bp

Genome Length

3165535 bp

Protein-coding Genes

2765 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carboxymuconolactone decarboxylase family proteinWG950_07755P76222Negative1699527 - 170011721950.1
osmc family proteinWG950_07760P0ADX3Positive1700199 - 170062415902.0
single-stranded-dna-specific exonuclease recjWG950_07765O32044Positive1700643 - 170232863089.4
helix-turn-helix domain-containing proteinWG950_07770Q0P9V4Negative1702573 - 170497891693.2
hypothetical proteinWG950_07775Not AvailableNegative1705037 - 170573227250.3
duf2200 domain-containing proteinWG950_07780Not AvailableNegative1705790 - 170615814606.7
yiix/yebb-like n1pc/p60 family cysteine hydrolaseWG950_07785P32167Negative1706188 - 170686825819.9
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferaseWG950_07790P0AFG7Negative1707026 - 170824943856.8
2-oxoglutarate dehydrogenase e1 componentWG950_07795P0AFG5Negative1708438 - 1711173104373.0
Trna-asnNot AvailableNot AvailablePositive1711359 - 1711432Not Available

Displaying genes 1551 – 1560 of 2823 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.