Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Loigolactobacillus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Lactobacillaceae |
| Genus | Loigolactobacillus |
| Species | Loigolactobacillus coryniformis |
| Strain | 34 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | air of cowshed; artisanal Tulum cheese; cheese; dairy; fermented meat; kimchi; silage; Tulum cheese |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
838828 bp
Thymine Count
839973 bp
Guanine Count
639977 bp
Cytosine Count
632730 bp
Genome Length
2951508 bp
Protein-coding Genes
2729 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| group ii intron reverse transcriptase/maturase | LC20001_12995 | Q47688 | Negative | 2692907 - 2694289 | 52930.0 |
| Trna-gln | Not Available | Not Available | Positive | 2694777 - 2694848 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 2694854 - 2694934 | Not Available |
| phosphoesterase | LC20001_13010 | Not Available | Negative | 2695016 - 2695843 | 31425.3 |
| peptide abc transporter permease | LC20001_13015 | P94408 | Negative | 2695954 - 2697414 | 53359.6 |
| nad-dependent dehydratase | LC20001_13020 | O07609 | Negative | 2697956 - 2698597 | 23493.8 |
| peptide-methionine (s)-s-oxide reductase | LC20001_13025 | Q9CFC8 | Negative | 2698686 - 2699522 | 32026.2 |
| type ii-a crispr-associated protein csn2 | LC20001_13030 | Not Available | Negative | 2701667 - 2702341 | 26226.4 |
| crispr-associated endonuclease cas2 | LC20001_13035 | Q1WVJ7 | Negative | 2702338 - 2702643 | 11966.8 |
| subtype ii crispr-associated endonuclease cas1 | LC20001_13040 | G3ECR2 | Negative | 2702621 - 2703526 | 34033.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
