Arachnia rubra SK-1

Gram-positiveRod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Propionibacteriaceae

Genus

Arachnia

Description

Arachnia rubra SK-1 is a Gram-positive rod-shaped bacterium notable for its presence of flagella, which may contribute to its motility. The organism is characterized by having a single replicon, indicating a streamlined genomic structure that could be advantageous for its adaptability and replication efficiency. The accession number for Arachnia rubra SK-1 is AP024463.1, which provides a reference for researchers looking to access its genomic information. The presence of flagella suggests that this bacterium may be capable of active movement in its environment, potentially influencing its ecological niche and interactions with other microorganisms. In terms of biological and ecological implications, the motility conferred by flagella could allow Arachnia rubra SK-1 to navigate through various substrates, seek nutrients, or evade unfavorable conditions. This adaptability may play a role in its survival and ecological interactions, such as competition with other microbial species or symbiotic relationships. Understanding these traits can provide insights into the ecological roles of Arachnia rubra SK-1 and its potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyPropionibacteriaceae
GenusArachnia
SpeciesArachnia rubra
StrainSK-1

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Arachnia rubra SK-1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arachnia rubra SK-1, Complete Genome

Gene Summary

Adenine Count

592604 bp

Thymine Count

594776 bp

Guanine Count

1065804 bp

Cytosine Count

1063788 bp

Genome Length

3316972 bp

Protein-coding Genes

3024 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
microcompartment protein pdubSK1NUM_28380B1VB63Positive3117979 - 311879427470.6
propanediol dehydratase large subunitSK1NUM_28390P37450Positive3118806 - 312046760204.3
propanediol dehydratase medium subunitSK1NUM_28400O31041Positive3120477 - 312117224221.0
propanediol dehydratase small subunitSK1NUM_28410O31042Positive3121183 - 312174620420.1
diol dehydratase reactivase subunit alphaSK1NUM_28420B1VB67Positive3121780 - 312359463453.8
propanediol dehydrataseSK1NUM_28430O68196Positive3123591 - 312395613272.1
hypothetical proteinSK1NUM_28440P0DUV5Positive3123956 - 312478928957.0
carboxysome shell proteinSK1NUM_28450Q187N0Positive3124786 - 31250558979.04
ethanolamine utilization protein eutjSK1NUM_28460P0A207Positive3125052 - 312587928958.6
hypothetical proteinSK1NUM_28470Not AvailablePositive3125876 - 312673630758.0

Displaying genes 2891 – 2900 of 3079 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.