Arachnia rubra SK-1

Gram-positiveRod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Propionibacteriaceae

Genus

Arachnia

Description

Arachnia rubra SK-1 is a Gram-positive rod-shaped bacterium notable for its presence of flagella, which may contribute to its motility. The organism is characterized by having a single replicon, indicating a streamlined genomic structure that could be advantageous for its adaptability and replication efficiency. The accession number for Arachnia rubra SK-1 is AP024463.1, which provides a reference for researchers looking to access its genomic information. The presence of flagella suggests that this bacterium may be capable of active movement in its environment, potentially influencing its ecological niche and interactions with other microorganisms. In terms of biological and ecological implications, the motility conferred by flagella could allow Arachnia rubra SK-1 to navigate through various substrates, seek nutrients, or evade unfavorable conditions. This adaptability may play a role in its survival and ecological interactions, such as competition with other microbial species or symbiotic relationships. Understanding these traits can provide insights into the ecological roles of Arachnia rubra SK-1 and its potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyPropionibacteriaceae
GenusArachnia
SpeciesArachnia rubra
StrainSK-1

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Arachnia rubra SK-1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arachnia rubra SK-1, Complete Genome

Gene Summary

Adenine Count

592604 bp

Thymine Count

594776 bp

Guanine Count

1065804 bp

Cytosine Count

1063788 bp

Genome Length

3316972 bp

Protein-coding Genes

3024 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
membrane proteinSK1NUM_14870O32064Positive1648790 - 164928717954.6
rna polymerase-binding protein rbpaSK1NUM_14880Q9RKY0Negative1649268 - 164960312432.6
glycerophosphoryl diester phosphodiesteraseSK1NUM_14890O07244Negative1649646 - 165043728896.1
pyridoxal kinase pdxySK1NUM_14900Q1AYE5Positive1650488 - 165134230040.6
udp-n-acetylglucosamine 1-carboxyvinyltransferaseSK1NUM_14910Q8R9G7Negative1651364 - 165289956428.2
dihydrolipoyl dehydrogenaseSK1NUM_14920P66005Positive1652976 - 165438550121.9
hypothetical proteinSK1NUM_14930A0PLB8Positive1654595 - 16548619757.94
upf0256 proteinSK1NUM_14940Q9K4F4Negative1654862 - 165613045748.9
yggs family pyridoxal phosphate enzymeSK1NUM_14950Q9CPD5Negative1656234 - 165696827363.4
amidohydrolaseSK1NUM_14960A0A1I9LN01Positive1656958 - 165842752505.2

Displaying genes 1511 – 1520 of 3079 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.