Arachnia rubra SK-1

Gram-positiveRod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Propionibacteriaceae

Genus

Arachnia

Description

Arachnia rubra SK-1 is a Gram-positive rod-shaped bacterium notable for its presence of flagella, which may contribute to its motility. The organism is characterized by having a single replicon, indicating a streamlined genomic structure that could be advantageous for its adaptability and replication efficiency. The accession number for Arachnia rubra SK-1 is AP024463.1, which provides a reference for researchers looking to access its genomic information. The presence of flagella suggests that this bacterium may be capable of active movement in its environment, potentially influencing its ecological niche and interactions with other microorganisms. In terms of biological and ecological implications, the motility conferred by flagella could allow Arachnia rubra SK-1 to navigate through various substrates, seek nutrients, or evade unfavorable conditions. This adaptability may play a role in its survival and ecological interactions, such as competition with other microbial species or symbiotic relationships. Understanding these traits can provide insights into the ecological roles of Arachnia rubra SK-1 and its potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyPropionibacteriaceae
GenusArachnia
SpeciesArachnia rubra
StrainSK-1

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Arachnia rubra SK-1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arachnia rubra SK-1, Complete Genome

Gene Summary

Adenine Count

592604 bp

Thymine Count

594776 bp

Guanine Count

1065804 bp

Cytosine Count

1063788 bp

Genome Length

3316972 bp

Protein-coding Genes

3024 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad-dependent protein deacylaseSK1NUM_14080Q8NSM4Negative1561579 - 156240929321.6
pyrrolidone-carboxylate peptidaseSK1NUM_14090Q5JEL5Positive1562421 - 156305622464.1
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide isomeraseSK1NUM_14100Q47QS4Positive1563073 - 156386427518.9
haloacid dehalogenaseSK1NUM_14110Q08891Positive1563973 - 156621382850.1
hypothetical proteinSK1NUM_14120Not AvailablePositive1566210 - 156772754770.8
hypothetical proteinSK1NUM_14130Not AvailablePositive1567724 - 156846427458.3
hypothetical proteinSK1NUM_14140Q82G40Positive1568474 - 156942435409.4
putative transcriptional regulatory proteinSK1NUM_14150Q6A8L0Positive1569481 - 157025427687.2
crossover junction endodeoxyribonuclease ruvcSK1NUM_14160B1W3G2Positive1570274 - 157080718717.7
holliday junction atp-dependent dna helicase ruvaSK1NUM_14170Q47N42Positive1570804 - 157141520645.8

Displaying genes 1431 – 1440 of 3079 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.