Frateuria soli 5GH9-11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Frateuria

Description

Frateuria soli 5GH9-11 is characterized by having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The genomic data for this strain can be accessed under the accession number CP088252.1, which provides a basis for further genomic analysis and potential comparative studies with other strains within the same genus or related taxa. The presence of only one replicon may suggest a simplified regulatory mechanism, which could be advantageous for survival in diverse ecological niches. This trait often allows for efficient replication and stability, potentially enabling Frateuria soli 5GH9-11 to thrive in specific habitats where resource competition is high. The ability to maintain a single replicon can also facilitate quicker responses to environmental changes, as the genetic information can be accessed and utilized rapidly. In summary, the traits of Frateuria soli 5GH9-11, particularly its single replicon as documented in accession CP088252.1, point towards a microbial strategy that may enhance its ecological resilience. Understanding these characteristics could provide insights into its role in microbial communities and its interactions with the environment, highlighting the importance of genomic structure in microbial ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusFrateuria
SpeciesFrateuria soli
Strain5GH9-11

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frateuria soli 5GH9-11, Complete Genome

Gene Summary

Adenine Count

550162 bp

Thymine Count

543315 bp

Guanine Count

1195976 bp

Cytosine Count

1199067 bp

Genome Length

3488520 bp

Protein-coding Genes

3131 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseLQ771_05655Q4UTW8Positive1238564 - 123982344353.4
hd domain-containing proteinLQ771_05660Q4UU85Positive1239972 - 124080831273.1
leucyl/phenylalanyl-trna--protein transferaseLQ771_05665Q8PL03Negative1240805 - 124152726282.6
gnat family n-acetyltransferaseLQ771_05670Not AvailableNegative1241524 - 124266042037.7
3-phosphoserine/phosphohydroxythreonine transaminaseLQ771_05675B4SP45Positive1242823 - 124390839181.9
prephenate dehydrataseLQ771_05680P27603Positive1243949 - 124503739692.5
3-phosphoshikimate 1-carboxyvinyltransferaseLQ771_05685Q3BUZ1Positive1245034 - 124635945887.4
3-deoxy-manno-octulosonate cytidylyltransferaseLQ771_05690B4SQQ0Positive1246638 - 124741127573.1
excinuclease abc subunit uvrcLQ771_05695Q0A8X6Positive1247481 - 124930766715.3
cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferaseLQ771_05700Q1C8L0Positive1249357 - 124997122562.4

Displaying genes 1131 – 1140 of 3190 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.