Sphingomonas morindae NBD5

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas morindae NBD5 is a rod-shaped bacterium characterized by the presence of flagella, which contribute to its motility. This organism contains a unique genomic structure with a total of four replicons, indicating a complex genetic makeup that may play a role in its adaptability and functionality within various environments. The specific genomic sequences of Sphingomonas morindae NBD5 are documented under the accession numbers CP084930.1, CP084931.1, CP084932.1, and CP084933.1. These accessions allow for further genomic analysis and comparison with other strains or species within the Sphingomonas genus, which is known for its diverse metabolic capabilities. The ecological role of Sphingomonas morindae NBD5 may be significant, as members of the Sphingomonas genus are often implicated in the degradation of complex organic compounds and pollutants. This suggests that Sphingomonas morindae NBD5 could play a beneficial role in bioremediation processes or in maintaining ecosystem health through its ability to break down environmental contaminants. Understanding its specific traits and genomic information can enhance our insight into its ecological functions and potential applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas morindae
StrainNBD5

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas morindae NBD5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas morindae NBD5, Complete Genome

Gene Summary

Adenine Count

529637 bp

Thymine Count

528325 bp

Guanine Count

1215205 bp

Cytosine Count

1218619 bp

Genome Length

3491786 bp

Protein-coding Genes

3263 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acyl-coa/acyl-acp dehydrogenaseLHA26_17140Q0ZIH5Negative69260 - 7031838009.0
type vi secretion system contractile sheath small subunitLHA26_17145Q9I749Positive70556 - 7108619687.4
type vi secretion system contractile sheath large subunitLHA26_17150Q9I748Positive71112 - 7260555564.9
type vi secretion system tube protein hcpLHA26_17155Q9I747Positive72656 - 7314417189.2
hypothetical proteinLHA26_17160Not AvailablePositive73226 - 7470752858.3
virulence protein scie typeLHA26_17165Q9I746Positive74814 - 7561428245.7
type vi secretion system baseplate subunit tsseLHA26_17170Q9I745Positive75611 - 7613519372.9
type vi secretion system baseplate subunit tssfLHA26_17175Q9I744Positive76135 - 7800367853.3
type vi secretion system baseplate subunit tssgLHA26_17180Not AvailablePositive77967 - 7900436997.5
type vi secretion system atpase tsshLHA26_17185Q9I742Positive79001 - 8164393956.1

Displaying genes 3421 – 3430 of 3997 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.