Sphingomonas morindae NBD5

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas morindae NBD5 is a rod-shaped bacterium characterized by the presence of flagella, which contribute to its motility. This organism contains a unique genomic structure with a total of four replicons, indicating a complex genetic makeup that may play a role in its adaptability and functionality within various environments. The specific genomic sequences of Sphingomonas morindae NBD5 are documented under the accession numbers CP084930.1, CP084931.1, CP084932.1, and CP084933.1. These accessions allow for further genomic analysis and comparison with other strains or species within the Sphingomonas genus, which is known for its diverse metabolic capabilities. The ecological role of Sphingomonas morindae NBD5 may be significant, as members of the Sphingomonas genus are often implicated in the degradation of complex organic compounds and pollutants. This suggests that Sphingomonas morindae NBD5 could play a beneficial role in bioremediation processes or in maintaining ecosystem health through its ability to break down environmental contaminants. Understanding its specific traits and genomic information can enhance our insight into its ecological functions and potential applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas morindae
StrainNBD5

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas morindae NBD5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas morindae NBD5, Complete Genome

Gene Summary

Adenine Count

529637 bp

Thymine Count

528325 bp

Guanine Count

1215205 bp

Cytosine Count

1218619 bp

Genome Length

3491786 bp

Protein-coding Genes

3263 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dead/deah box helicaseLHA26_14055P9WH04Negative2860667 - 286233460494.9
hsp20 family proteinLHA26_14060O86110Negative2862440 - 286291317635.1
duf1465 family proteinLHA26_14065Not AvailablePositive2863120 - 286359617289.7
4a-hydroxytetrahydrobiopterin dehydrataseLHA26_14070A5V667Negative2863607 - 286390611027.9
efflux rnd transporter periplasmic adaptor subunitLHA26_14075P0C069Positive2864103 - 286530242969.1
multidrug efflux rnd transporter permease subunitLHA26_14080Q8G2M6Positive2865310 - 2868498113898.0
tolc family proteinLHA26_14085P15727Positive2868495 - 287012956091.8
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alphaLHA26_14090Q9I1M2Positive2870231 - 287150246123.6
alpha-ketoacid dehydrogenase subunit betaLHA26_14095Q9I1M1Positive2871499 - 287251236603.9
2-oxo acid dehydrogenase subunit e2LHA26_14100P09062Positive2872514 - 287382446005.0

Displaying genes 2861 – 2870 of 3997 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.