Sphingomonas morindae NBD5

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas morindae NBD5 is a rod-shaped bacterium characterized by the presence of flagella, which contribute to its motility. This organism contains a unique genomic structure with a total of four replicons, indicating a complex genetic makeup that may play a role in its adaptability and functionality within various environments. The specific genomic sequences of Sphingomonas morindae NBD5 are documented under the accession numbers CP084930.1, CP084931.1, CP084932.1, and CP084933.1. These accessions allow for further genomic analysis and comparison with other strains or species within the Sphingomonas genus, which is known for its diverse metabolic capabilities. The ecological role of Sphingomonas morindae NBD5 may be significant, as members of the Sphingomonas genus are often implicated in the degradation of complex organic compounds and pollutants. This suggests that Sphingomonas morindae NBD5 could play a beneficial role in bioremediation processes or in maintaining ecosystem health through its ability to break down environmental contaminants. Understanding its specific traits and genomic information can enhance our insight into its ecological functions and potential applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas morindae
StrainNBD5

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas morindae NBD5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas morindae NBD5, Complete Genome

Gene Summary

Adenine Count

529637 bp

Thymine Count

528325 bp

Guanine Count

1215205 bp

Cytosine Count

1218619 bp

Genome Length

3491786 bp

Protein-coding Genes

3263 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s12 methylthiotransferase rimoLHA26_12405A5V3Z4Negative2527606 - 252893748021.8
ggdef domain-containing proteinLHA26_12410Q9HT84Negative2528989 - 253015240595.0
lysm peptidoglycan-binding domain-containing m23 family metallopeptidaseLHA26_12415A0A0H3C9Q9Negative2530159 - 253124437718.1
serine--trna ligaseLHA26_12420A5V3Y9Negative2531311 - 253259146224.8
hypothetical proteinLHA26_12425Not AvailablePositive2532914 - 253353119266.7
hypothetical proteinLHA26_12430Not AvailablePositive2533620 - 253424921255.0
rna polymerase-binding protein dksaLHA26_12435P0CAU3Positive2534673 - 253513117520.4
pilz domain-containing proteinLHA26_12440Not AvailablePositive2535286 - 253568713942.5
ydch family proteinLHA26_12445Not AvailableNegative2535745 - 25359005732.94
duf465 domain-containing proteinLHA26_12450Not AvailablePositive2536103 - 25363007289.86

Displaying genes 2531 – 2540 of 3997 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.