Sphingomonas morindae NBD5

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas morindae NBD5 is a rod-shaped bacterium characterized by the presence of flagella, which contribute to its motility. This organism contains a unique genomic structure with a total of four replicons, indicating a complex genetic makeup that may play a role in its adaptability and functionality within various environments. The specific genomic sequences of Sphingomonas morindae NBD5 are documented under the accession numbers CP084930.1, CP084931.1, CP084932.1, and CP084933.1. These accessions allow for further genomic analysis and comparison with other strains or species within the Sphingomonas genus, which is known for its diverse metabolic capabilities. The ecological role of Sphingomonas morindae NBD5 may be significant, as members of the Sphingomonas genus are often implicated in the degradation of complex organic compounds and pollutants. This suggests that Sphingomonas morindae NBD5 could play a beneficial role in bioremediation processes or in maintaining ecosystem health through its ability to break down environmental contaminants. Understanding its specific traits and genomic information can enhance our insight into its ecological functions and potential applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas morindae
StrainNBD5

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas morindae NBD5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas morindae NBD5, Complete Genome

Gene Summary

Adenine Count

529637 bp

Thymine Count

528325 bp

Guanine Count

1215205 bp

Cytosine Count

1218619 bp

Genome Length

3491786 bp

Protein-coding Genes

3263 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s13LHA26_11105Q5NQ42Positive2243158 - 224352613651.9
30s ribosomal protein s11LHA26_11110A5V5X6Positive2243623 - 224401213951.7
dna-directed rna polymerase subunit alphaLHA26_11115A5V5X5Positive2244104 - 224517138495.4
50s ribosomal protein l17LHA26_11120A5V5X4Positive2245286 - 224570815396.5
prolyl oligopeptidase family serine peptidaseLHA26_11125Q06903Positive2245849 - 224791274806.4
molybdenum cofactor biosynthesis protein bLHA26_11130P0AF00Negative2247934 - 224846119128.9
lytic transglycosylase domain-containing proteinLHA26_11135P0AGC4Negative2248479 - 225031464469.9
uracil-dna glycosylaseLHA26_11140Not AvailableNegative2250311 - 225105726029.4
electron transfer flavoprotein-ubiquinone oxidoreductaseLHA26_11145Q9HZP5Positive2251189 - 225284159596.5
tetratricopeptide repeat proteinLHA26_11150Not AvailablePositive2252936 - 225460057019.3

Displaying genes 2271 – 2280 of 3997 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.