Geodermatophilus sp.

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus sp. is characterized as a cocci-shaped bacterium, indicating that its cells are spherical in structure. This organism exhibits the presence of flagella, which are tail-like structures that can facilitate movement and may play a role in its ecological interactions. Genetically, Geodermatophilus sp. has a single replicon, suggesting a relatively simple genomic organization which could influence its adaptability and reproduction. The accession number CP135963.1 refers to its genomic sequence, which provides a valuable resource for understanding its genetic makeup and potential functions. The presence of flagella may enhance its ability to colonize various environments, particularly in soil, where many Geodermatophilus species are typically found. From an ecological perspective, the adaptations of Geodermatophilus sp. to its environment may facilitate its survival in challenging conditions. This adaptability is crucial for its role in soil ecosystems, where it may contribute to nutrient cycling and the degradation of organic materials. Understanding the specific traits of Geodermatophilus sp. can provide insights into the ecological functions of cocci-shaped bacteria in soil microbiomes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus sp. DSM 44513
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus sp. , Complete Genome

Gene Summary

Adenine Count

570966 bp

Thymine Count

578278 bp

Guanine Count

1740948 bp

Cytosine Count

1738652 bp

Genome Length

4628844 bp

Protein-coding Genes

4395 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pilus assembly protein tadbRTG05_02805Not AvailablePositive602657 - 60344826175.9
type ii secretion system f family proteinRTG05_02810Not AvailablePositive603445 - 60416723577.1
duf4244 domain-containing proteinRTG05_02815Not AvailablePositive604292 - 6045619034.73
tade family type iv pilus minor pilinRTG05_02820O69623Positive604561 - 60494712476.1
flp pilus-assembly tade/g-like family proteinRTG05_02825Not AvailablePositive604944 - 60531811695.3
dead/deah box helicaseRTG05_02830P50830Negative605315 - 60782288193.2
sodium-translocating pyrophosphataseRTG05_02835Q9X913Positive608041 - 61030275599.5
hypothetical proteinRTG05_02840Not AvailablePositive610481 - 61079210088.7
alpha/beta hydrolaseRTG05_02845P9WLK6Positive610789 - 61226750578.0
type i dna topoisomeraseRTG05_02850A0R5D9Positive612469 - 615336103170.0

Displaying genes 561 – 570 of 4453 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.