Geodermatophilus sp.

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus sp. is characterized as a cocci-shaped bacterium, indicating that its cells are spherical in structure. This organism exhibits the presence of flagella, which are tail-like structures that can facilitate movement and may play a role in its ecological interactions. Genetically, Geodermatophilus sp. has a single replicon, suggesting a relatively simple genomic organization which could influence its adaptability and reproduction. The accession number CP135963.1 refers to its genomic sequence, which provides a valuable resource for understanding its genetic makeup and potential functions. The presence of flagella may enhance its ability to colonize various environments, particularly in soil, where many Geodermatophilus species are typically found. From an ecological perspective, the adaptations of Geodermatophilus sp. to its environment may facilitate its survival in challenging conditions. This adaptability is crucial for its role in soil ecosystems, where it may contribute to nutrient cycling and the degradation of organic materials. Understanding the specific traits of Geodermatophilus sp. can provide insights into the ecological functions of cocci-shaped bacteria in soil microbiomes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus sp. DSM 44513
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus sp. , Complete Genome

Gene Summary

Adenine Count

570966 bp

Thymine Count

578278 bp

Guanine Count

1740948 bp

Cytosine Count

1738652 bp

Genome Length

4628844 bp

Protein-coding Genes

4395 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinRTG05_15710Not AvailablePositive3241504 - 324203116346.1
ferritin-like domain-containing proteinRTG05_15715Not AvailablePositive3242047 - 324250815488.3
penicillin-binding transpeptidase domain-containing proteinRTG05_15720P42971Negative3242514 - 324441564244.1
gnat family n-acetyltransferaseRTG05_15725Not AvailableNegative3244588 - 324543929178.2
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseRTG05_15730Q47RY0Negative3245448 - 324662340897.5
site-2 protease family proteinRTG05_15735Q9KYS0Negative3246665 - 324802948479.1
1-deoxy-d-xylulose-5-phosphate reductoisomeraseRTG05_15740Q9KYS1Negative3248040 - 324923640754.7
duf2631 domain-containing proteinRTG05_15745Q8NP09Positive3249308 - 324962812071.4
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnRTG05_15750A4FMC5Negative3249742 - 325091741525.8
hypothetical proteinRTG05_15755Not AvailablePositive3251016 - 325217334768.8

Displaying genes 3141 – 3150 of 4453 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.