Geodermatophilus sp.

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus sp. is characterized as a cocci-shaped bacterium, indicating that its cells are spherical in structure. This organism exhibits the presence of flagella, which are tail-like structures that can facilitate movement and may play a role in its ecological interactions. Genetically, Geodermatophilus sp. has a single replicon, suggesting a relatively simple genomic organization which could influence its adaptability and reproduction. The accession number CP135963.1 refers to its genomic sequence, which provides a valuable resource for understanding its genetic makeup and potential functions. The presence of flagella may enhance its ability to colonize various environments, particularly in soil, where many Geodermatophilus species are typically found. From an ecological perspective, the adaptations of Geodermatophilus sp. to its environment may facilitate its survival in challenging conditions. This adaptability is crucial for its role in soil ecosystems, where it may contribute to nutrient cycling and the degradation of organic materials. Understanding the specific traits of Geodermatophilus sp. can provide insights into the ecological functions of cocci-shaped bacteria in soil microbiomes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus sp. DSM 44513
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus sp. , Complete Genome

Gene Summary

Adenine Count

570966 bp

Thymine Count

578278 bp

Guanine Count

1740948 bp

Cytosine Count

1738652 bp

Genome Length

4628844 bp

Protein-coding Genes

4395 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-dehydroquinate synthaseRTG05_09410Q47QY7Positive1936247 - 193730836303.4
type ii 3-dehydroquinate dehydrataseRTG05_09415A4X610Positive1937325 - 193777115786.7
xaa-pro peptidase family proteinRTG05_09420P54518Positive1937848 - 193894838042.2
elongation factor pRTG05_09425C1B4I4Positive1938949 - 193950920131.8
transcription antitermination factor nusbRTG05_09430A0LUG6Positive1939527 - 193993414684.5
transcriptional regulatorRTG05_09435Not AvailableNegative1940092 - 194064620227.8
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrrRTG05_09440Q8FT38Positive1940874 - 194145820507.6
aspartate carbamoyltransferase catalytic subunitRTG05_09445A0LUG3Positive1941455 - 194237532791.5
dihydroorotaseRTG05_09450Q9KXR3Positive1942372 - 194365844760.4
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunitRTG05_09455Q9KXR5Positive1943655 - 194481840311.7

Displaying genes 1881 – 1890 of 4453 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.