Geodermatophilus sp.

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus sp. is characterized as a cocci-shaped bacterium, indicating that its cells are spherical in structure. This organism exhibits the presence of flagella, which are tail-like structures that can facilitate movement and may play a role in its ecological interactions. Genetically, Geodermatophilus sp. has a single replicon, suggesting a relatively simple genomic organization which could influence its adaptability and reproduction. The accession number CP135963.1 refers to its genomic sequence, which provides a valuable resource for understanding its genetic makeup and potential functions. The presence of flagella may enhance its ability to colonize various environments, particularly in soil, where many Geodermatophilus species are typically found. From an ecological perspective, the adaptations of Geodermatophilus sp. to its environment may facilitate its survival in challenging conditions. This adaptability is crucial for its role in soil ecosystems, where it may contribute to nutrient cycling and the degradation of organic materials. Understanding the specific traits of Geodermatophilus sp. can provide insights into the ecological functions of cocci-shaped bacteria in soil microbiomes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus sp. DSM 44513
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus sp. , Complete Genome

Gene Summary

Adenine Count

570966 bp

Thymine Count

578278 bp

Guanine Count

1740948 bp

Cytosine Count

1738652 bp

Genome Length

4628844 bp

Protein-coding Genes

4395 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyltransferase family 4 proteinRTG05_09210O07147Positive1893921 - 189514143068.7
hypothetical proteinRTG05_09215Not AvailablePositive1895153 - 189570420113.4
pyridoxal 5'-phosphate synthase lyase subunit pdxsRTG05_09220Q5YTD8Positive1895765 - 189668231825.2
heparan-alpha-glucosaminide n-acetyltransferase domain-containing proteinRTG05_09225Not AvailablePositive1896679 - 189779138772.1
pyridoxal 5'-phosphate synthase glutaminase subunit pdxtRTG05_09230C1B4C5Positive1897817 - 189848522756.2
yebc/pmpr family dna-binding transcriptional regulatorRTG05_09235C5C5Q3Positive1898482 - 189923426342.9
is481 family transposaseRTG05_09240P37007Negative1899231 - 190022337788.4
crossover junction endodeoxyribonuclease ruvcRTG05_09245A4FBA6Positive1900475 - 190104119461.6
holliday junction branch migration protein ruvaRTG05_09250Q9L290Positive1901038 - 190167621894.4
holliday junction branch migration dna helicase ruvbRTG05_09255A4TBQ5Positive1901673 - 190282740104.3

Displaying genes 1841 – 1850 of 4453 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.