Marinobacter similis A3d10

Motile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Marinobacteraceae

Genus

Marinobacter

Description

Marinobacter similis A3d10 is a Gram-negative bacterium identified in marine environments, specifically within the Pacific Ocean and Port Philip Bay in the Tasman Sea. This organism is notable for its presence on the surface of polyhydroxybutyrate (PHB) films suspended in the water, suggesting a potential role in the degradation or transformation of bioplastics in marine ecosystems. M. similis A3d10 exhibits mobility, which is facilitated by the presence of flagella. This motility likely aids in its adaptation and survival in the dynamic marine environment, allowing it to navigate towards nutrients or other ecological niches. The genome of Marinobacter similis A3d10 is characterized by a single replicon, as indicated by its accession number CP007151.1. This genomic structure is typical for many bacteria and provides insights into its reproduction and genetic stability. From an ecological perspective, the ability of Marinobacter similis A3d10 to inhabit the surface of PHB films highlights its potential role in the microbial degradation of bioplastics. This trait may contribute to the overall microbial community dynamics and nutrient cycling within marine environments, particularly in areas impacted by plastic pollution. Understanding the capabilities and ecological functions of such microorganisms can inform strategies for bioremediation and sustainable management of marine resources.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyMarinobacteraceae
GenusMarinobacter
SpeciesMarinobacter similis
StrainA3d10

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine; Pacific Ocean; PHB film surface suspended in the water; Port Philip Bay; Tasman Sea; the Tasman Sea
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinobacter similis A3d10, Complete Genome

Gene Summary

Adenine Count

825327 bp

Thymine Count

860395 bp

Guanine Count

1180640 bp

Cytosine Count

1109534 bp

Genome Length

3975896 bp

Protein-coding Genes

2667 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nif3 1AU14_17825Q9KD39Positive3728020 - 372833111490.5
adp-ribose pyrophosphataseAU14_17830P93740Negative3728332 - 372888621326.2
dna mismatch repair protein muttAU14_17835Q7N3M0Positive3728985 - 372957221934.2
hypothetical proteinAU14_17840P40882Positive3729583 - 373011619100.2
fe-s proteinAU14_17845Q8CW10Positive3730113 - 37302956896.27
phosphoribosylglycinamide formyltransferaseAU14_17850A1U3I4Positive3730340 - 373153943626.1
carbonate dehydrataseAU14_17855P63688Positive3731665 - 373286142917.7
rrna methyltransferaseAU14_17870P94538Negative3735512 - 373625527042.3
alcohol dehydrogenaseAU14_17880Q46856Negative3737205 - 373836241860.1
acetylpolyamine aminohydrolaseAU14_17885Q9I6H0Negative3738432 - 373946637554.1

Displaying genes 2551 – 2560 of 2745 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.