Marinobacter similis A3d10

Motile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Marinobacteraceae

Genus

Marinobacter

Description

Marinobacter similis A3d10 is a Gram-negative bacterium identified in marine environments, specifically within the Pacific Ocean and Port Philip Bay in the Tasman Sea. This organism is notable for its presence on the surface of polyhydroxybutyrate (PHB) films suspended in the water, suggesting a potential role in the degradation or transformation of bioplastics in marine ecosystems. M. similis A3d10 exhibits mobility, which is facilitated by the presence of flagella. This motility likely aids in its adaptation and survival in the dynamic marine environment, allowing it to navigate towards nutrients or other ecological niches. The genome of Marinobacter similis A3d10 is characterized by a single replicon, as indicated by its accession number CP007151.1. This genomic structure is typical for many bacteria and provides insights into its reproduction and genetic stability. From an ecological perspective, the ability of Marinobacter similis A3d10 to inhabit the surface of PHB films highlights its potential role in the microbial degradation of bioplastics. This trait may contribute to the overall microbial community dynamics and nutrient cycling within marine environments, particularly in areas impacted by plastic pollution. Understanding the capabilities and ecological functions of such microorganisms can inform strategies for bioremediation and sustainable management of marine resources.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyMarinobacteraceae
GenusMarinobacter
SpeciesMarinobacter similis
StrainA3d10

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine; Pacific Ocean; PHB film surface suspended in the water; Port Philip Bay; Tasman Sea; the Tasman Sea
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinobacter similis A3d10, Complete Genome

Gene Summary

Adenine Count

825327 bp

Thymine Count

860395 bp

Guanine Count

1180640 bp

Cytosine Count

1109534 bp

Genome Length

3975896 bp

Protein-coding Genes

2667 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
holliday junction resolvaseAU14_00720A1U1C1Positive145639 - 14619919586.7
holliday junction dna helicase ruvaAU14_00725A1U1C0Positive146196 - 14682522520.3
holliday junction dna helicase ruvbAU14_00730A1U1B9Positive146978 - 14800937744.3
4-hydroxybenzoyl-coa thioesteraseAU14_00735P0A8Z5Positive148002 - 14843916411.8
protein tolqAU14_00740P50598Positive148454 - 14914325548.8
biopolymer transporter exbdAU14_00745P50599Positive149179 - 14962516089.6
translocation protein tolbAU14_00755Q21HP0Positive150696 - 15202148636.7
flagellar motor protein motbAU14_00760P0A138Positive152087 - 15265620414.4
hypothetical proteinAU14_00765P0A130Positive152681 - 15346028853.9
Trna-lysNot AvailableNot AvailablePositive153546 - 153621Not Available

Displaying genes 141 – 150 of 2745 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.