Marinobacter similis A3d10

Motile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Marinobacteraceae

Genus

Marinobacter

Description

Marinobacter similis A3d10 is a Gram-negative bacterium identified in marine environments, specifically within the Pacific Ocean and Port Philip Bay in the Tasman Sea. This organism is notable for its presence on the surface of polyhydroxybutyrate (PHB) films suspended in the water, suggesting a potential role in the degradation or transformation of bioplastics in marine ecosystems. M. similis A3d10 exhibits mobility, which is facilitated by the presence of flagella. This motility likely aids in its adaptation and survival in the dynamic marine environment, allowing it to navigate towards nutrients or other ecological niches. The genome of Marinobacter similis A3d10 is characterized by a single replicon, as indicated by its accession number CP007151.1. This genomic structure is typical for many bacteria and provides insights into its reproduction and genetic stability. From an ecological perspective, the ability of Marinobacter similis A3d10 to inhabit the surface of PHB films highlights its potential role in the microbial degradation of bioplastics. This trait may contribute to the overall microbial community dynamics and nutrient cycling within marine environments, particularly in areas impacted by plastic pollution. Understanding the capabilities and ecological functions of such microorganisms can inform strategies for bioremediation and sustainable management of marine resources.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyMarinobacteraceae
GenusMarinobacter
SpeciesMarinobacter similis
StrainA3d10

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine; Pacific Ocean; PHB film surface suspended in the water; Port Philip Bay; Tasman Sea; the Tasman Sea
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinobacter similis A3d10


Gene Summary

Adenine Count

825327 bp

Thymine Count

860395 bp

Guanine Count

1180640 bp

Cytosine Count

1109534 bp

Genome Length

3975896 bp

Protein-coding Genes

2667 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
magnesium transporterAU14_12305O34442Negative2569896 - 257125749448.0
glmz(srna)-inactivating ntpaseAU14_12315A1U474Negative2571661 - 257254533383.9
pts fructose transporter subunit iiaAU14_12320Q9HVV4Negative2572583 - 257305317344.7
ribosome hibernation promoting factor hpfAU14_12325P17160Negative2573140 - 257344811655.9
organic solvent tolerance protein ostaAU14_12340P45074Negative2575955 - 257650919843.0
hypothetical proteinAU14_12345Not AvailableNegative2576493 - 257707721673.5
abc transporter permeaseAU14_12365P45030Positive2579787 - 258056927372.1
organic solvent abc transporter substrate-binding proteinAU14_12370P64605Positive2580604 - 258105315656.7
toluene tolerance proteinAU14_12375Q9Z3Z9Positive2581114 - 258176724547.1
ntp binding proteinAU14_12380Not AvailablePositive2581776 - 258209011134.3

Displaying genes 1751 – 1760 of 2745 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.