Catalinimonas niigatensis A6F-52

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Catalimonadaceae

Genus

Catalinimonas

Description

Catalinimonas niigatensis A6F-52 is characterized by having a single replicon, indicating a streamlined genomic organization. This trait may contribute to its adaptability and efficiency in various environmental conditions. The organism is documented under the accession number CP119422.1 in genomic databases, which provides a reference for researchers studying its genetic makeup and functions. The genomic data associated with Catalinimonas niigatensis A6F-52 can offer insights into its metabolic pathways and ecological interactions. As a member of the microbial community, the organism likely plays a role in nutrient cycling and may influence the dynamics of its habitat. Understanding its genomic traits can shed light on its potential applications in biotechnology or environmental management. The presence of a single replicon suggests a level of evolutionary specialization, which might be advantageous in specific ecological niches. This could imply that Catalinimonas niigatensis A6F-52 has adapted to utilize available resources efficiently, impacting the microbial community structure and function where it resides. Further exploration of its genetic traits could enhance our understanding of its ecological roles and potential applications in sustainable practices.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCatalimonadaceae
GenusCatalinimonas
SpeciesCatalinimonas niigatensis
StrainA6F-52

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Catalinimonas niigatensis A6F-52, Complete Genome

Gene Summary

Adenine Count

2062994 bp

Thymine Count

2071989 bp

Guanine Count

1496476 bp

Cytosine Count

1503023 bp

Genome Length

7134482 bp

Protein-coding Genes

5822 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
merr family transcriptional regulatorPZB72_04005Q50900Positive1015523 - 101642534837.4
rna polymerase sigma factorPZB72_04010Q7AKG9Positive1016835 - 101734719864.0
phytoene desaturase family proteinPZB72_04015A0A0A1GKA2Positive1017362 - 101883756310.6
phytoene/squalene synthase family proteinPZB72_04020P54977Positive1018871 - 101970432560.3
4-hydroxy-3-methylbut-2-enyl diphosphate reductasePZB72_04025Q11YY5Positive1019751 - 102059631894.0
fatty acid desaturasePZB72_04030Q4VKB4Positive1020602 - 102129127202.1
hypothetical proteinPZB72_04035Not AvailableNegative1021281 - 10215299349.66
winged helix dna-binding proteinPZB72_04040Not AvailableNegative1021602 - 102226726040.4
tonb-dependent receptorPZB72_04045Not AvailablePositive1022340 - 102470988350.4
gfo/idh/moca family oxidoreductasePZB72_04050O34371Positive1024998 - 102634751284.6

Displaying genes 801 – 810 of 5870 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.