Catalinimonas niigatensis A6F-52

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Catalimonadaceae

Genus

Catalinimonas

Description

Catalinimonas niigatensis A6F-52 is characterized by having a single replicon, indicating a streamlined genomic organization. This trait may contribute to its adaptability and efficiency in various environmental conditions. The organism is documented under the accession number CP119422.1 in genomic databases, which provides a reference for researchers studying its genetic makeup and functions. The genomic data associated with Catalinimonas niigatensis A6F-52 can offer insights into its metabolic pathways and ecological interactions. As a member of the microbial community, the organism likely plays a role in nutrient cycling and may influence the dynamics of its habitat. Understanding its genomic traits can shed light on its potential applications in biotechnology or environmental management. The presence of a single replicon suggests a level of evolutionary specialization, which might be advantageous in specific ecological niches. This could imply that Catalinimonas niigatensis A6F-52 has adapted to utilize available resources efficiently, impacting the microbial community structure and function where it resides. Further exploration of its genetic traits could enhance our understanding of its ecological roles and potential applications in sustainable practices.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCatalimonadaceae
GenusCatalinimonas
SpeciesCatalinimonas niigatensis
StrainA6F-52

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Catalinimonas niigatensis A6F-52, Complete Genome

Gene Summary

Adenine Count

2062994 bp

Thymine Count

2071989 bp

Guanine Count

1496476 bp

Cytosine Count

1503023 bp

Genome Length

7134482 bp

Protein-coding Genes

5822 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ragb/susd family nutrient uptake outer membrane proteinPZB72_06255T2KNB8Negative1610565 - 161206756487.0
tonb-dependent receptorPZB72_06260T2KM18Negative1612071 - 1615508127761.0
fecr domain-containing proteinPZB72_06265Not AvailableNegative1615660 - 161667038590.7
rna polymerase sigma-70 factorPZB72_06270P44790Negative1616770 - 161740224518.1
helix-turn-helix domain-containing proteinPZB72_06275Not AvailablePositive1619177 - 16194018364.98
is630 family transposasePZB72_06280P16943Positive1619440 - 162026131430.1
alkaline phosphatase family proteinPZB72_06285Q5EZ72Negative1620650 - 162189447185.1
susd/ragb family nutrient-binding outer membrane lipoproteinPZB72_06290Not AvailableNegative1622063 - 162352355371.5
susc/raga family tonb-linked outer membrane proteinPZB72_06295T2KM18Negative1623536 - 1626700117179.0
sodium:solute symporter family proteinPZB72_06300Q9VE46Positive1627137 - 162869656492.3

Displaying genes 1251 – 1260 of 5870 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.