Escherichia coli EDL 931

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli EDL 931 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which contributes to its motility. This strain is classified as mesophilic, with an optimal growth temperature of 37 degrees Celsius, aligning with the typical body temperature of warm-blooded hosts. E. coli EDL 931 possesses three replicons, indicating a complex genomic structure that may play a role in its adaptability and survival in various environments. This strain exists as a free-living organism, allowing it to thrive in diverse ecological niches beyond its association with host organisms. The genetic data for E. coli EDL 931 can be accessed through the following accession numbers: CP038405.1, CP038406.1, and CP038407.1, which provide insights into its genomic features and potential metabolic capabilities. Understanding the traits of E. coli EDL 931 highlights its ecological role as a free-living bacterium in various environments, as well as its adaptability to optimal growth conditions. The ability to thrive at 37 degrees Celsius suggests a potential association with warm-blooded hosts, reflecting the bacterium's versatility in both free-living and host-associated lifestyles. This adaptability underscores the ecological significance of E. coli EDL 931 within microbial communities and its potential interactions with other organisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainEDL 931

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Escherichia coli EDL 931
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature37
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli EDL 931, Complete Genome

Gene Summary

Adenine Count

1349416 bp

Thymine Count

1352236 bp

Guanine Count

1376148 bp

Cytosine Count

1381502 bp

Genome Length

5459302 bp

Protein-coding Genes

4648 genes

Non-Coding Genes

943 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
catecholate siderophore receptor fiuE3153_19810Q8X7W7Positive3753277 - 375555981960.4
pkhd-type hydroxylase ybixE3153_19815Q8X7W8Positive3755601 - 375628725908.7
c4-type zinc finger protein ybiiE3153_19820P41039Positive3756363 - 37566299818.45
duf1471 domain-containing proteinE3153_19825P0AAX4Positive3756894 - 37571548538.17
malate/lactate/ureidoglycolate dehydrogenaseE3153_19830P58409Negative3757383 - 375846838886.3
dna-binding protein ybibE3153_19835P30177Negative3758609 - 375957135186.9
atp-dependent dna helicase dingE3153_19840Q8X7X9Negative3759599 - 376174981463.9
type iii effectorE3153_19845Q57MS9Negative3762033 - 376404576850.2
atp-dependent rna helicase rhleE3153_19850P25888Negative3764653 - 376602050049.5
dna-binding transcriptional regulator cecrE3153_19855P0ACU0Positive3766249 - 376692025018.1

Displaying genes 4091 – 4100 of 5710 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

No health effects information available for this bacterium.