Agromyces marinus H23-8

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Agromyces

Description

Agromyces marinus H23-8 is a Gram-positive, rod-shaped bacterium. This organism is characterized by having two replicons, which is notable as many bacteria typically possess a single circular chromosome. The presence of two replicons may have implications for its genetic diversity and adaptability. The strain has been cataloged under two different accessions: CP087879.1 and AP027734.1. These accessions provide a basis for researchers to access its genomic data and further study its genetic makeup and potential applications. Biologically, the classification of Agromyces marinus H23-8 as a Gram-positive bacterium suggests that it possesses a thick peptidoglycan layer in its cell wall, which is a defining feature of this group. This structural characteristic often correlates with specific ecological roles, such as resistance to certain environmental stresses. In an ecological context, the genus Agromyces is known to inhabit various soil environments, and members of this genus are often involved in the degradation of organic matter. The rod shape of Agromyces marinus H23-8 may facilitate its mobility and colonization in marine or coastal ecosystems. Overall, the unique traits of Agromyces marinus H23-8 contribute to its potential role in nutrient cycling and organic matter decomposition in its natural habitat.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusAgromyces
SpeciesAgromyces marinus
StrainH23-8

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agromyces marinus H23-8, Complete Genome

Gene Summary

Adenine Count

454183 bp

Thymine Count

459225 bp

Guanine Count

1146531 bp

Cytosine Count

1142077 bp

Genome Length

3202016 bp

Protein-coding Genes

2958 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDSM26151_09030Not AvailableNegative959312 - 96077853296.1
hypothetical proteinDSM26151_09040Not AvailableNegative960775 - 96195042425.8
hypothetical proteinDSM26151_09050Not AvailablePositive962049 - 96252517064.1
pseudaminic acid synthaseDSM26151_09060O24980Negative962504 - 96356236997.6
udp-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferaseDSM26151_09070P39623Negative963580 - 96470740683.2
udp-n-acetylglucosamine 4,6-dehydratase (inverting)DSM26151_09080Q5QKR8Negative964707 - 96569336625.5
udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferaseDSM26151_09090Q58462Positive965800 - 96680736642.1
8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferaseDSM26151_09100P39626Positive966812 - 96752526356.6
udp-n-acetyl-d-glucosamine 6-dehydrogenaseDSM26151_09110O59284Positive967561 - 96887747006.9
udp-galactopyranose mutaseDSM26151_09120P9WIQ0Positive968917 - 97007144098.4

Displaying genes 901 – 910 of 6486 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.