Agromyces marinus H23-8

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Agromyces

Description

Agromyces marinus H23-8 is a Gram-positive, rod-shaped bacterium. This organism is characterized by having two replicons, which is notable as many bacteria typically possess a single circular chromosome. The presence of two replicons may have implications for its genetic diversity and adaptability. The strain has been cataloged under two different accessions: CP087879.1 and AP027734.1. These accessions provide a basis for researchers to access its genomic data and further study its genetic makeup and potential applications. Biologically, the classification of Agromyces marinus H23-8 as a Gram-positive bacterium suggests that it possesses a thick peptidoglycan layer in its cell wall, which is a defining feature of this group. This structural characteristic often correlates with specific ecological roles, such as resistance to certain environmental stresses. In an ecological context, the genus Agromyces is known to inhabit various soil environments, and members of this genus are often involved in the degradation of organic matter. The rod shape of Agromyces marinus H23-8 may facilitate its mobility and colonization in marine or coastal ecosystems. Overall, the unique traits of Agromyces marinus H23-8 contribute to its potential role in nutrient cycling and organic matter decomposition in its natural habitat.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusAgromyces
SpeciesAgromyces marinus
StrainH23-8

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agromyces marinus H23-8, Complete Genome

Gene Summary

Adenine Count

454183 bp

Thymine Count

459225 bp

Guanine Count

1146531 bp

Cytosine Count

1142077 bp

Genome Length

3202016 bp

Protein-coding Genes

2958 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
riboflavin biosynthesis protein ribbaGCM10025870_08960A8LY38Positive875243 - 87654746401.1
6,7-dimethyl-8-ribityllumazine synthaseGCM10025870_08970Q6AGR7Positive876544 - 87701415877.9
amp-dependent synthetaseGCM10025870_08980B0CN26Negative877070 - 87975195115.0
pseudouridine-5'-phosphate glycosidaseGCM10025870_08990A4F929Positive879850 - 88077031294.1
hypothetical proteinGCM10025870_09000Q53W83Positive880754 - 88170432056.8
abc transporterGCM10025870_09010Q9ZNB0Positive881759 - 88383773594.3
hypothetical proteinGCM10025870_09020Not AvailablePositive883992 - 88479228122.9
hypothetical proteinGCM10025870_09030Not AvailablePositive884859 - 88534417345.2
chrd domain-containing proteinGCM10025870_09040Not AvailablePositive885453 - 88596816902.0
phosphoenolpyruvate carboxykinaseGCM10025870_09050Q6AGS4Negative886121 - 88798968281.4

Displaying genes 3921 – 3930 of 6486 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.