Agromyces marinus H23-8

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Agromyces

Description

Agromyces marinus H23-8 is a Gram-positive, rod-shaped bacterium. This organism is characterized by having two replicons, which is notable as many bacteria typically possess a single circular chromosome. The presence of two replicons may have implications for its genetic diversity and adaptability. The strain has been cataloged under two different accessions: CP087879.1 and AP027734.1. These accessions provide a basis for researchers to access its genomic data and further study its genetic makeup and potential applications. Biologically, the classification of Agromyces marinus H23-8 as a Gram-positive bacterium suggests that it possesses a thick peptidoglycan layer in its cell wall, which is a defining feature of this group. This structural characteristic often correlates with specific ecological roles, such as resistance to certain environmental stresses. In an ecological context, the genus Agromyces is known to inhabit various soil environments, and members of this genus are often involved in the degradation of organic matter. The rod shape of Agromyces marinus H23-8 may facilitate its mobility and colonization in marine or coastal ecosystems. Overall, the unique traits of Agromyces marinus H23-8 contribute to its potential role in nutrient cycling and organic matter decomposition in its natural habitat.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusAgromyces
SpeciesAgromyces marinus
StrainH23-8

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agromyces marinus H23-8, Complete Genome

Gene Summary

Adenine Count

454183 bp

Thymine Count

459225 bp

Guanine Count

1146531 bp

Cytosine Count

1142077 bp

Genome Length

3202016 bp

Protein-coding Genes

2958 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative succinate-semialdehyde dehydrogenaseDSM26151_19630A0PST9Positive2106081 - 210764655337.2
sec-independent protein translocase protein tatbDSM26151_19640A4F8J0Negative2107699 - 210808814527.4
putative o-methyltransferaseDSM26151_19650A3Q3Q7Positive2108180 - 210881222059.3
hypothetical proteinDSM26151_19660Not AvailableNegative2108813 - 21089504707.77
hypothetical proteinDSM26151_19670Not AvailableNegative2109101 - 211035146253.8
putative succinyl-diaminopimelate desuccinylase dapeDSM26151_19680A0R2G4Negative2110306 - 211143940519.9
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseDSM26151_19690C5CBB6Positive2111717 - 211267633087.4
acyl-homoserine lactone acylase quipDSM26151_19700Q9I4U2Positive2112790 - 211546894404.2
regulatory protein asncDSM26151_19710Q8U0P3Negative2115518 - 211594915625.0
ornithine cyclodeaminaseDSM26151_19720P09773Positive2116074 - 211710236969.8

Displaying genes 1961 – 1970 of 6486 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.