Agromyces marinus H23-8

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Agromyces

Description

Agromyces marinus H23-8 is a Gram-positive, rod-shaped bacterium. This organism is characterized by having two replicons, which is notable as many bacteria typically possess a single circular chromosome. The presence of two replicons may have implications for its genetic diversity and adaptability. The strain has been cataloged under two different accessions: CP087879.1 and AP027734.1. These accessions provide a basis for researchers to access its genomic data and further study its genetic makeup and potential applications. Biologically, the classification of Agromyces marinus H23-8 as a Gram-positive bacterium suggests that it possesses a thick peptidoglycan layer in its cell wall, which is a defining feature of this group. This structural characteristic often correlates with specific ecological roles, such as resistance to certain environmental stresses. In an ecological context, the genus Agromyces is known to inhabit various soil environments, and members of this genus are often involved in the degradation of organic matter. The rod shape of Agromyces marinus H23-8 may facilitate its mobility and colonization in marine or coastal ecosystems. Overall, the unique traits of Agromyces marinus H23-8 contribute to its potential role in nutrient cycling and organic matter decomposition in its natural habitat.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusAgromyces
SpeciesAgromyces marinus
StrainH23-8

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agromyces marinus H23-8, Complete Genome

Gene Summary

Adenine Count

454183 bp

Thymine Count

459225 bp

Guanine Count

1146531 bp

Cytosine Count

1142077 bp

Genome Length

3202016 bp

Protein-coding Genes

2958 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomeraseDSM26151_12030Q6AE15Positive1279549 - 128029526145.1
hypothetical proteinDSM26151_12040Not AvailablePositive1280279 - 128106727200.2
hypothetical proteinDSM26151_12050A0A0A2IDH4Positive1281148 - 128253048238.2
atp-dependent rna helicase srmbDSM26151_12060P30015Positive1282527 - 1287152164046.0
endonuclease 8DSM26151_12070O86820Positive1287154 - 128793028378.9
hypothetical proteinDSM26151_12080Not AvailableNegative1288110 - 128850513610.8
translation initiation factor if-3DSM26151_12090O88060Positive1288822 - 128938820752.0
50s ribosomal protein l35DSM26151_12100B0RHC1Positive1289443 - 12896377127.87
50s ribosomal protein l20DSM26151_12110Q6ADC9Positive1289670 - 129005614594.8
23s rrna (guanosine-2'-o-)-methyltransferase rlmbDSM26151_12120P94538Positive1290152 - 129095228240.6

Displaying genes 1201 – 1210 of 6486 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.