Polaribacter huanghezhanensis SM1202

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Polaribacter

Description

Polaribacter huanghezhanensis SM1202 is a Gram-negative, rod-shaped bacterium. It possesses a single replicon, which indicates a relatively simple genomic structure. The complete genome of this species is documented under the accession number CP128595.1, providing a valuable resource for further research and analysis. The classification of Polaribacter huanghezhanensis within the broader context of microbial diversity highlights its potential ecological significance. As a member of the genus Polaribacter, it may play a role in biogeochemical cycles, particularly in polar and subpolar environments where such bacteria are commonly found. Members of this genus are often associated with marine habitats and can contribute to processes such as organic matter degradation and nutrient cycling. The specific traits of Polaribacter huanghezhanensis SM1202, particularly its Gram-negative nature and rod shape, suggest adaptations that may be beneficial for survival in its native environment. Gram-negative bacteria typically have a thinner peptidoglycan layer and an outer membrane, which can provide resistance to certain environmental stresses. This could enable Polaribacter huanghezhanensis to thrive in diverse ecological niches, where interactions with other microorganisms and the surrounding environment may influence its biological functions. Overall, the traits of Polaribacter huanghezhanensis SM1202 underscore its potential contributions to marine ecosystems and highlight the importance of studying such organisms to better understand microbial roles in environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusPolaribacter
SpeciesPolaribacter huanghezhanensis
StrainSM1202

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Polaribacter huanghezhanensis SM1202
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polaribacter huanghezhanensis SM1202


Gene Summary

Adenine Count

891203 bp

Thymine Count

882519 bp

Guanine Count

412410 bp

Cytosine Count

401742 bp

Genome Length

2587874 bp

Protein-coding Genes

2391 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thiol-disulfide oxidoreductase resaKCTC32516_01281Not AvailablePositive1344676 - 134537427275.7
hypothetical proteinKCTC32516_01282Not AvailableNegative1345433 - 13456247470.52
nadp-dependent 3-hydroxy acid dehydrogenase ydfgKCTC32516_01283P25970Positive1345658 - 134638027060.5
phosphoribosyl-atp pyrophosphataseKCTC32516_01284Not AvailablePositive1346467 - 134691016951.5
coenzyme pqq synthesis protein bKCTC32516_01285Q6F9J2Negative1347184 - 134813736251.9
branched-chain-amino-acid aminotransferase 2KCTC32516_01286P39576Negative1348220 - 134927538999.4
hypothetical proteinKCTC32516_01287Not AvailablePositive1349396 - 134990218810.8
trna 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmcKCTC32516_01288A1V8X2Positive1349910 - 135057825499.6
hypothetical proteinKCTC32516_01289Not AvailablePositive1350650 - 13507965753.46
undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferaseKCTC32516_01290D4GYG7Negative1350798 - 135191943069.8

Displaying genes 1281 – 1290 of 2437 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.