Corynebacterium atrinae

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Corynebacteriaceae

Genus

Corynebacterium

Description

Corynebacterium atrinae is characterized by its possession of three replicons. This trait may contribute to its genetic diversity and adaptability in various environments. The organism has been documented in several genomic accessions, specifically CP046977.1, CP046978.1, and CP046979.1. These accessions provide a foundation for further genetic and functional studies of C. atrinae. The multiple replicons suggest a potential for complex regulatory mechanisms and responses to environmental pressures, as bacteria often utilize plasmids to acquire new traits beneficial for survival. The presence of three replicons may also facilitate horizontal gene transfer, which is a critical factor in bacterial evolution and the acquisition of new functionalities, such as antibiotic resistance or metabolic capabilities. From a biological and ecological perspective, the adaptability of C. atrinae is significant. Its genetic structure may allow it to thrive in diverse habitats, potentially including marine environments, given its association with aquatic organisms. Understanding the genomic features of C. atrinae can provide insights into its ecological roles and interactions within microbial communities, as well as its potential applications in biotechnology or medicine. Further research into this species could elucidate its contributions to microbial ecology and its interactions with other organisms in its environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyCorynebacteriaceae
GenusCorynebacterium
SpeciesCorynebacterium atrinae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Corynebacterium atrinae
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corynebacterium atrinae , Complete Genome

Gene Summary

Adenine Count

509032 bp

Thymine Count

508767 bp

Guanine Count

850521 bp

Cytosine Count

852830 bp

Genome Length

2721150 bp

Protein-coding Genes

2550 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
endo-1,4-beta-xylanase z precursorCATRI_05395P35866Negative1081297 - 108250543286.6
alpha/beta hydrolase family proteinCATRI_05400Not AvailablePositive1082609 - 108323222247.3
spermidine synthaseCATRI_05405P60593Negative1083206 - 108401229104.6
pp_01049CATRI_05410Not AvailablePositive1084105 - 1085178Not Available
hypothetical proteinCATRI_05415Not AvailablePositive1085175 - 108613133733.3
c4-dicarboxylate transporter/malic acid transport proteinCATRI_05420Not AvailablePositive1086194 - 108713533483.4
dna polymerase iii polc-typeCATRI_05425Q9KA72Negative1087122 - 108779024738.1
hypothetical proteinCATRI_05430Not AvailableNegative1087796 - 10880268306.58
d-alanyl-d-alanine- carboxypeptidase/endopeptidase amph precursorCATRI_05435O69773Negative1088027 - 108898333783.6
helix-turn-helix domain proteinCATRI_05440Not AvailableNegative1088983 - 108940815359.2

Displaying genes 1071 – 1080 of 2699 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.