Mycobacterium crocinum czh-42

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycolicibacterium

Description

Mycobacterium crocinum czh-42 is a rod-shaped bacterium characterized by the presence of flagella, which may contribute to its motility. This organism has a unique genetic structure, possessing three replicons, indicating a complex genomic organization that might facilitate various metabolic processes and adaptations. The bacterium is cataloged under several accessions in genetic databases: CP092362.2, CP092363.2, and CP103314.1. These accessions provide a resource for researchers interested in the genomics of M. crocinum czh-42, allowing for further exploration of its genetic features and potential applications. In terms of biological and ecological insight, the flagellated structure suggests that M. crocinum czh-42 could exhibit a degree of motility, which might play a role in its ecological interactions, such as nutrient acquisition or colonization of specific niches. The presence of multiple replicons may also imply a flexible adaptation strategy to varying environmental conditions, potentially influencing its ecological success in diverse habitats. Understanding these traits can help elucidate the role of M. crocinum czh-42 in its ecosystem and its potential applications in biotechnology or medicine.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycolicibacterium
SpeciesMycolicibacterium crocinum
Strainczh-42

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium crocinum czh-42, Complete Genome

Gene Summary

Adenine Count

996376 bp

Thymine Count

996476 bp

Guanine Count

1988719 bp

Cytosine Count

1984286 bp

Genome Length

5965857 bp

Protein-coding Genes

5786 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trka family potassium uptake proteinMI149_12505Q53949Negative2541419 - 254209623984.7
apc family permeaseMI149_12510P96589Positive2542184 - 254417872278.1
tram domain-containing proteinMI149_12515Q8FPI1Positive2544186 - 254538842895.3
msmeg_6728 family proteinMI149_12520Not AvailablePositive2545407 - 254591318499.9
na+/h+ antiporter nhaaMI149_12525A3PYK5Positive2545985 - 254730746519.1
1-deoxy-d-xylulose-5-phosphate synthaseMI149_12530A1UF44Positive2547336 - 254925267724.2
ribonuclease dMI149_12535Q28RA7Negative2549254 - 255053746595.9
duf3000 domain-containing proteinMI149_12540Not AvailableNegative2550539 - 255107519114.4
uroporphyrinogen decarboxylaseMI149_12545A1T7Z4Positive2551228 - 255227736960.8
protoporphyrinogen oxidaseMI149_12550P0A5A8Positive2552274 - 255362346250.5

Displaying genes 2511 – 2520 of 6077 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.