Mycobacterium sediminis

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycolicibacterium

Description

Mycobacterium sediminis is a rod-shaped bacterium characterized by the presence of flagella, which may contribute to its motility in various environments. This species has a single replicon, indicating a streamlined genetic structure that could affect its replication and adaptability. The accession number for Mycobacterium sediminis is AP022588.1, which provides a reference for genetic and genomic studies related to this organism. Understanding the genetic makeup of Mycobacterium sediminis can help elucidate its ecological role and potential applications in biodegradation or bioremediation, particularly in sediment environments where this bacterium is likely to thrive. The presence of flagella suggests that Mycobacterium sediminis may be capable of movement toward nutrients or away from harmful substances in its environment, which is a significant trait for survival in complex microbial communities. This motility could facilitate interactions with other microorganisms and potentially influence nutrient cycling in sediments. Overall, Mycobacterium sediminis exhibits unique traits that contribute to its ecological dynamics and interactions within sedimentary ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycolicibacterium
SpeciesMycolicibacterium sediminis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium sediminis , Complete Genome

Gene Summary

Adenine Count

969993 bp

Thymine Count

962147 bp

Guanine Count

2158958 bp

Cytosine Count

2159543 bp

Genome Length

6250641 bp

Protein-coding Genes

6035 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i polyketide synthaseMSEDJ_49980A0A0D1DNX1Negative5203957 - 5213196326910.0
epimeraseMSEDJ_49990Q60A54Negative5213773 - 521476836079.2
abc transporter atp-binding proteinMSEDJ_50000Q47T99Positive5214945 - 521604539170.7
spermidine/putrescine abc transporter substrate-binding proteinMSEDJ_50010P76108Positive5216087 - 521727442865.9
abc transporter permeaseMSEDJ_50020P77156Positive5217271 - 521814930939.6
abc transporter permeaseMSEDJ_50030P0AFR9Positive5218149 - 521894928432.1
mfs transporterMSEDJ_50040P34698Positive5219014 - 522027344339.1
hypothetical proteinMSEDJ_50050Not AvailableNegative5220277 - 522069615257.8
membrane proteinMSEDJ_50060Not AvailableNegative5220771 - 522202144247.4
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseMSEDJ_50070Q3J2K9Positive5222147 - 522284223984.5

Displaying genes 5041 – 5050 of 6086 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.