Mycobacterium sediminis

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycolicibacterium

Description

Mycobacterium sediminis is a rod-shaped bacterium characterized by the presence of flagella, which may contribute to its motility in various environments. This species has a single replicon, indicating a streamlined genetic structure that could affect its replication and adaptability. The accession number for Mycobacterium sediminis is AP022588.1, which provides a reference for genetic and genomic studies related to this organism. Understanding the genetic makeup of Mycobacterium sediminis can help elucidate its ecological role and potential applications in biodegradation or bioremediation, particularly in sediment environments where this bacterium is likely to thrive. The presence of flagella suggests that Mycobacterium sediminis may be capable of movement toward nutrients or away from harmful substances in its environment, which is a significant trait for survival in complex microbial communities. This motility could facilitate interactions with other microorganisms and potentially influence nutrient cycling in sediments. Overall, Mycobacterium sediminis exhibits unique traits that contribute to its ecological dynamics and interactions within sedimentary ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycolicibacterium
SpeciesMycolicibacterium sediminis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium sediminis , Complete Genome

Gene Summary

Adenine Count

969993 bp

Thymine Count

962147 bp

Guanine Count

2158958 bp

Cytosine Count

2159543 bp

Genome Length

6250641 bp

Protein-coding Genes

6035 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferaseMSEDJ_46260A0R016Negative4783462 - 478461339641.1
cell division protein ftswMSEDJ_46270P63763Negative4784610 - 478627459465.4
phospho-n-acetylmuramoyl-pentapeptide- transferaseMSEDJ_46280A1TAX1Negative4786424 - 478750337678.5
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseMSEDJ_46290P0A5L5Negative4787500 - 478900250092.8
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseMSEDJ_46300A0QF47Negative4788999 - 479043849089.0
hypothetical proteinMSEDJ_46310Not AvailablePositive4790349 - 47906038655.06
penicillin-binding protein pbpbMSEDJ_46320A0R022Negative4790565 - 479247567586.2
hypothetical proteinMSEDJ_46330Not AvailableNegative4792472 - 479351235744.5
ribosomal rna small subunit methyltransferase hMSEDJ_46340A3Q1M6Negative4793512 - 479449835657.5
transcriptional regulator mrazMSEDJ_46350A3Q1M7Negative4794653 - 479508416047.7

Displaying genes 4661 – 4670 of 6086 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.