Streptomyces rapamycinicus AYB-994

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces rapamycinicus AYB-994 is a mesophilic bacterium characterized by the presence of flagella, which facilitates motility. This species thrives optimally at a temperature of 29°C, indicating its adaptation to moderate environmental conditions. The bacterium possesses two replicons, suggesting a complex genomic structure that may contribute to its metabolic versatility. Streptomyces species are well-known for their role in natural product biosynthesis, particularly antibiotics, and AYB-994 is no exception. Its genetic accessions, CP085193.1 and CP006567.1, provide a basis for further genomic and functional studies, potentially unveiling novel biosynthetic pathways and secondary metabolites. The ecological significance of Streptomyces rapamycinicus AYB-994 lies in its ability to thrive in soil environments, where it can contribute to nutrient cycling and interact with other microorganisms. The presence of flagella may enhance its ecological adaptability, allowing for movement towards favorable conditions or resources. Overall, the traits of Streptomyces rapamycinicus AYB-994 highlight its potential as a valuable organism for biotechnological applications, particularly in the development of new antibiotics and understanding microbial ecology in soil ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces rapamycinicus
StrainAYB-994

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces rapamycinicus AYB-994
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces rapamycinicus AYB-994, Complete Genome

Gene Summary

Adenine Count

1799751 bp

Thymine Count

1807887 bp

Guanine Count

4437731 bp

Cytosine Count

4420739 bp

Genome Length

12466108 bp

Protein-coding Genes

10197 genes

Non-Coding Genes

174 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii effector proteinLIV37_49880Q9ZGI3Positive12072097 - 12074896103450.0
type iii effector proteinLIV37_49885I6XD69Positive12074812 - 1207561428307.4
alcohol dehydrogenase catalytic domain-containing proteinLIV37_49890B2HIL7Positive12076190 - 1207670817676.1
type iii effector proteinLIV37_49895Q9ZGI4Positive12076774 - 1207785238356.9
acyl carrier proteinLIV37_49900Q9ZGI3Positive12077821 - 1207854625447.7
polyketide synthase docking domain-containing proteinLIV37_49905Not AvailablePositive12078543 - 120786383610.29
type iii effector proteinLIV37_49910Q07017Positive12078668 - 1208103383367.8
sdr family nad(p)-dependent oxidoreductaseLIV37_49915Q9ZGI5Positive12081738 - 1208453095168.8
acyltransferase domain-containing proteinLIV37_49920Q03132Positive12084515 - 1208572943508.7
polyketide synthase dehydratase domain-containing proteinLIV37_49925I6XD69Positive12085612 - 1208689245090.3

Displaying genes 9981 – 9990 of 20446 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.