Streptomyces rapamycinicus AYB-994

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces rapamycinicus AYB-994 is a mesophilic bacterium characterized by the presence of flagella, which facilitates motility. This species thrives optimally at a temperature of 29°C, indicating its adaptation to moderate environmental conditions. The bacterium possesses two replicons, suggesting a complex genomic structure that may contribute to its metabolic versatility. Streptomyces species are well-known for their role in natural product biosynthesis, particularly antibiotics, and AYB-994 is no exception. Its genetic accessions, CP085193.1 and CP006567.1, provide a basis for further genomic and functional studies, potentially unveiling novel biosynthetic pathways and secondary metabolites. The ecological significance of Streptomyces rapamycinicus AYB-994 lies in its ability to thrive in soil environments, where it can contribute to nutrient cycling and interact with other microorganisms. The presence of flagella may enhance its ecological adaptability, allowing for movement towards favorable conditions or resources. Overall, the traits of Streptomyces rapamycinicus AYB-994 highlight its potential as a valuable organism for biotechnological applications, particularly in the development of new antibiotics and understanding microbial ecology in soil ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces rapamycinicus
StrainAYB-994

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces rapamycinicus AYB-994
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces rapamycinicus AYB-994, Complete Genome

Gene Summary

Adenine Count

1799751 bp

Thymine Count

1807887 bp

Guanine Count

4437731 bp

Cytosine Count

4420739 bp

Genome Length

12466108 bp

Protein-coding Genes

10197 genes

Non-Coding Genes

174 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diaminobutyrate acetyltransferaseLIV37_37620Q829L3Negative8907025 - 890757620007.6
hypothetical proteinLIV37_37625Not AvailableNegative8907896 - 890875029562.0
type iii effector proteinLIV37_37630H8F2P4Negative8908954 - 890943918004.4
amidohydrolase family proteinLIV37_37635P9WL22Positive8909834 - 891094340137.6
lpxtg cell wall anchor domain-containing proteinLIV37_37640Not AvailablePositive8911249 - 891214829890.8
rv2231c family pyridoxal phosphate-dependent protein cobcLIV37_37645P9WQ88Negative8912504 - 891364039087.7
sirohydrochlorin chelataseLIV37_37650O87690Negative8913651 - 891448729520.0
cobalamin biosynthesis proteinLIV37_37655P21635Negative8914557 - 891505715918.3
cobyrinate a,c-diamide synthaseLIV37_37660Q9RJ16Negative8915077 - 891652849397.0
cob(i)yrinic acid a,c-diamide adenosyltransferaseLIV37_37665Q9I472Negative8916522 - 891711822233.3

Displaying genes 7541 – 7550 of 20446 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.