Streptomyces rapamycinicus AYB-994

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces rapamycinicus AYB-994 is a mesophilic bacterium characterized by the presence of flagella, which facilitates motility. This species thrives optimally at a temperature of 29°C, indicating its adaptation to moderate environmental conditions. The bacterium possesses two replicons, suggesting a complex genomic structure that may contribute to its metabolic versatility. Streptomyces species are well-known for their role in natural product biosynthesis, particularly antibiotics, and AYB-994 is no exception. Its genetic accessions, CP085193.1 and CP006567.1, provide a basis for further genomic and functional studies, potentially unveiling novel biosynthetic pathways and secondary metabolites. The ecological significance of Streptomyces rapamycinicus AYB-994 lies in its ability to thrive in soil environments, where it can contribute to nutrient cycling and interact with other microorganisms. The presence of flagella may enhance its ecological adaptability, allowing for movement towards favorable conditions or resources. Overall, the traits of Streptomyces rapamycinicus AYB-994 highlight its potential as a valuable organism for biotechnological applications, particularly in the development of new antibiotics and understanding microbial ecology in soil ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces rapamycinicus
StrainAYB-994

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces rapamycinicus AYB-994
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces rapamycinicus AYB-994, Complete Genome

Gene Summary

Adenine Count

1799751 bp

Thymine Count

1807887 bp

Guanine Count

4437731 bp

Cytosine Count

4420739 bp

Genome Length

12466108 bp

Protein-coding Genes

10197 genes

Non-Coding Genes

174 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
permease-like cell division protein ftsxLIV37_30370Q7TX91Positive7202650 - 720356133650.5
pdz domain-containing proteinLIV37_30375O04073Positive7203630 - 720484142041.6
ssra-binding protein smpbLIV37_30380Q9L1S9Positive7204860 - 720533918230.8
Tmrna,resume consensus sequence (at 89): aataatcgccaacaccaaNot AvailableNot AvailablePositive7205468 - 7205836Not Available
type iii effector proteinLIV37_30390Not AvailableNegative7205904 - 720625612623.9
type iii effector proteinLIV37_30395Not AvailableNegative7206406 - 720694718481.7
type iii effector proteinLIV37_30400Not AvailableNegative7206957 - 72071486869.25
atp-binding proteinLIV37_30405Not AvailableNegative7207283 - 720775016829.0
xre family transcriptional regulatorLIV37_30410Not AvailablePositive7207970 - 720920544437.8
gnat family n-acetyltransferaseLIV37_30415Not AvailablePositive7209202 - 720974419995.8

Displaying genes 6091 – 6100 of 20446 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.