Streptomyces rapamycinicus AYB-994

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces rapamycinicus AYB-994 is a mesophilic bacterium characterized by the presence of flagella, which facilitates motility. This species thrives optimally at a temperature of 29°C, indicating its adaptation to moderate environmental conditions. The bacterium possesses two replicons, suggesting a complex genomic structure that may contribute to its metabolic versatility. Streptomyces species are well-known for their role in natural product biosynthesis, particularly antibiotics, and AYB-994 is no exception. Its genetic accessions, CP085193.1 and CP006567.1, provide a basis for further genomic and functional studies, potentially unveiling novel biosynthetic pathways and secondary metabolites. The ecological significance of Streptomyces rapamycinicus AYB-994 lies in its ability to thrive in soil environments, where it can contribute to nutrient cycling and interact with other microorganisms. The presence of flagella may enhance its ecological adaptability, allowing for movement towards favorable conditions or resources. Overall, the traits of Streptomyces rapamycinicus AYB-994 highlight its potential as a valuable organism for biotechnological applications, particularly in the development of new antibiotics and understanding microbial ecology in soil ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces rapamycinicus
StrainAYB-994

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces rapamycinicus AYB-994
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces rapamycinicus AYB-994, Complete Genome

Gene Summary

Adenine Count

1799751 bp

Thymine Count

1807887 bp

Guanine Count

4437731 bp

Cytosine Count

4420739 bp

Genome Length

12466108 bp

Protein-coding Genes

10197 genes

Non-Coding Genes

174 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
deaminated glutathione amidaseLIV37_27820P58054Negative6558063 - 655887228680.4
hypothetical proteinLIV37_27825Q59727Negative6559076 - 656005035610.6
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeLIV37_27830P40193Positive6560231 - 656166449800.8
aldo/keto reductaseLIV37_27835O05408Negative6561774 - 656279937087.9
helix-turn-helix transcriptional regulatorLIV37_27840Not AvailablePositive6562960 - 656380831424.6
apc family permeaseLIV37_27845Q8X845Positive6563949 - 656548754458.8
class i sam-dependent methyltransferaseLIV37_27850Not AvailableNegative6565450 - 656626229581.5
d-inositol-3-phosphate glycosyltransferaseLIV37_27855D7C367Positive6566589 - 656795048516.4
ybjn domain-containing proteinLIV37_27860P54139Positive6568015 - 656857220251.7
glycoside hydrolase family 55 proteinLIV37_27865Q9ZFH0Positive6568730 - 657047562659.8

Displaying genes 5581 – 5590 of 20446 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.