Streptomyces rapamycinicus AYB-994

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces rapamycinicus AYB-994 is a mesophilic bacterium characterized by the presence of flagella, which facilitates motility. This species thrives optimally at a temperature of 29°C, indicating its adaptation to moderate environmental conditions. The bacterium possesses two replicons, suggesting a complex genomic structure that may contribute to its metabolic versatility. Streptomyces species are well-known for their role in natural product biosynthesis, particularly antibiotics, and AYB-994 is no exception. Its genetic accessions, CP085193.1 and CP006567.1, provide a basis for further genomic and functional studies, potentially unveiling novel biosynthetic pathways and secondary metabolites. The ecological significance of Streptomyces rapamycinicus AYB-994 lies in its ability to thrive in soil environments, where it can contribute to nutrient cycling and interact with other microorganisms. The presence of flagella may enhance its ecological adaptability, allowing for movement towards favorable conditions or resources. Overall, the traits of Streptomyces rapamycinicus AYB-994 highlight its potential as a valuable organism for biotechnological applications, particularly in the development of new antibiotics and understanding microbial ecology in soil ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces rapamycinicus
StrainAYB-994

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces rapamycinicus AYB-994
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces rapamycinicus AYB-994, Complete Genome

Gene Summary

Adenine Count

1799751 bp

Thymine Count

1807887 bp

Guanine Count

4437731 bp

Cytosine Count

4420739 bp

Genome Length

12466108 bp

Protein-coding Genes

10197 genes

Non-Coding Genes

174 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
malonic semialdehyde reductaseLIV37_17750Q9FBN0Positive4348101 - 434872122647.0
nuclear transport factor 2 family proteinLIV37_17755Not AvailableNegative4348816 - 434921414646.6
nad(p)-dependent oxidoreductaseLIV37_17760Q9SA52Negative4349252 - 435017533774.1
non-ribosomal peptide synthetaseLIV37_17765A0A0S2E7Z1Negative4350256 - 4353102103366.0
duf4097 domain-containing proteinLIV37_17770Not AvailablePositive4353514 - 435437129261.6
helix-turn-helix transcriptional regulatorLIV37_17775P64588Positive4354371 - 435548941522.1
antibiotic biosynthesis monooxygenaseLIV37_17780Not AvailablePositive4355945 - 435668827455.8
quinone oxidoreductaseLIV37_17785O35017Negative4356811 - 435777333745.4
nadp-dependent malic enzymeLIV37_17790O34962Negative4357976 - 435920842411.4
abc transporter substrate-binding proteinLIV37_17795P0AEQ5Positive4359722 - 436067533175.6

Displaying genes 3681 – 3690 of 20446 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.