Pseudomonas chlororaphis subsp. aureofaciens EIII.9.25.1, L8

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas chlororaphis subsp. aureofaciens EIII.9.25.1, L8 is a Gram-negative bacterium characterized by its rod shape. This subspecies has a distinctive genetic makeup, possessing two replicons which contribute to its genomic structure. The specific accessions for this strain are CP027720.1 and LT629738.1, which are crucial for identifying its genetic sequence and understanding its biological functions. The classification of Pseudomonas chlororaphis subsp. aureofaciens as a member of the Pseudomonas genus highlights its ecological role, particularly in soil and plant interactions. This bacterium is known for its potential beneficial effects on plant health, including promoting growth and suppressing certain plant pathogens. The genetic traits associated with its two replicons may allow for versatile metabolic capabilities and adaptability to various environmental conditions. Given its rod shape and Gram-negative classification, Pseudomonas chlororaphis subsp. aureofaciens EIII.9.25.1, L8 is likely to engage in complex interactions within its ecosystem, contributing to nutrient cycling and possibly aiding in biocontrol strategies in agriculture. Understanding the specific traits and genetic information of this bacterium can provide insights into its applications in sustainable agriculture and its role in maintaining soil health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas chlororaphis
StrainEIII.9.25.1, L8

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas chlororaphis subsp. aureofaciens EIII.9.25.1, L8
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas chlororaphis subsp. aureofaciens EIII.9.25.1, L8, Complete Genome

Gene Summary

Adenine Count

1312390 bp

Thymine Count

1312744 bp

Guanine Count

2202352 bp

Cytosine Count

2210364 bp

Genome Length

7037850 bp

Protein-coding Genes

6234 genes

Non-Coding Genes

307 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative transcriptional regulatorSAMN04489803_6224Q9KMA5Positive6803812 - 680413211453.9
uncharacterized membrane protein yqae, homolog of blt101, upf0057 familySAMN04489803_6225Q9I5W9Positive6804263 - 68044215741.49
dipeptidyl aminopeptidase/acylaminoacyl peptidaseSAMN04489803_6226V5YMB3Negative6804472 - 680631367490.0
pyrroloquinoline quinone biosynthesis protein eSAMN04489803_6227Q4K4U8Negative6806279 - 680745143908.5
pyrroloquinoline quinone biosynthesis protein dSAMN04489803_6228Q3K5Q7Negative6807423 - 680769810374.4
pyrroloquinoline-quinone synthaseSAMN04489803_6229Q88QV6Negative6807695 - 680844728919.3
pyrroloquinoline quinone biosynthesis protein bSAMN04489803_6230C3K348Negative6808584 - 680949533177.5
coenzyme pqq biosynthesis probable peptidase pqqfSAMN04489803_6231P55174Negative6809798 - 681226390139.5
predicted amidohydrolaseSAMN04489803_6232P55176Negative6812312 - 681310629250.7
lysine 2-monooxygenaseSAMN04489803_6233P06617Negative6813211 - 681490862912.8

Displaying genes 12661 – 12670 of 12867 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.