Pseudomonas chlororaphis subsp. aureofaciens EIII.9.25.1, L8

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas chlororaphis subsp. aureofaciens EIII.9.25.1, L8 is a Gram-negative bacterium characterized by its rod shape. This subspecies has a distinctive genetic makeup, possessing two replicons which contribute to its genomic structure. The specific accessions for this strain are CP027720.1 and LT629738.1, which are crucial for identifying its genetic sequence and understanding its biological functions. The classification of Pseudomonas chlororaphis subsp. aureofaciens as a member of the Pseudomonas genus highlights its ecological role, particularly in soil and plant interactions. This bacterium is known for its potential beneficial effects on plant health, including promoting growth and suppressing certain plant pathogens. The genetic traits associated with its two replicons may allow for versatile metabolic capabilities and adaptability to various environmental conditions. Given its rod shape and Gram-negative classification, Pseudomonas chlororaphis subsp. aureofaciens EIII.9.25.1, L8 is likely to engage in complex interactions within its ecosystem, contributing to nutrient cycling and possibly aiding in biocontrol strategies in agriculture. Understanding the specific traits and genetic information of this bacterium can provide insights into its applications in sustainable agriculture and its role in maintaining soil health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas chlororaphis
StrainEIII.9.25.1, L8

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas chlororaphis subsp. aureofaciens EIII.9.25.1, L8
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas chlororaphis subsp. aureofaciens EIII.9.25.1, L8, Complete Genome

Gene Summary

Adenine Count

1312390 bp

Thymine Count

1312744 bp

Guanine Count

2202352 bp

Cytosine Count

2210364 bp

Genome Length

7037850 bp

Protein-coding Genes

6234 genes

Non-Coding Genes

307 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN04489803_6000Not AvailableNegative6560547 - 656112520938.0
lysophospholipase, alpha-beta hydrolase superfamilySAMN04489803_6001O34705Positive6561235 - 656215834883.0
hypothetical proteinSAMN04489803_6002Not AvailableNegative6562262 - 656301427169.6
sm-20-related proteinSAMN04489803_6003Q91YE3Positive6563195 - 656381823485.8
uncharacterized conserved protein ybbk, duf523 familySAMN04489803_6004Q45584Positive6563821 - 656430316522.8
amino acid abc transporter substrate-binding protein, paat familySAMN04489803_6005P0AEN0Negative6564400 - 656517328209.8
protein of unknown functionSAMN04489803_6006Not AvailablePositive6565307 - 656574415359.6
d-3-phosphoglycerate dehydrogenaseSAMN04489803_6007P0A9T2Negative6565846 - 656707544230.3
glycolate oxidase, subunit glcdSAMN04489803_6008A4VGK4Positive6567256 - 656867451827.8
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)SAMN04489803_6009P76004Positive6568730 - 656939523803.8

Displaying genes 12441 – 12450 of 12867 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.